Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01048 and BPUM_0535
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:41
# Commandline: needle
# -asequence dna-align/BSNT_01048___groEL.1.24716.seq
# -bsequence dna-align/BPUM_0535___groEL.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01048___groEL-BPUM_0535___groEL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01048___groEL-BPUM_0535___groEL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01048___groEL
# 2: BPUM_0535___groEL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1636
# Identity: 1396/1636 (85.3%)
# Similarity: 1396/1636 (85.3%)
# Gaps: 5/1636 ( 0.3%)
# Score: 6009.0
#
#
#=======================================
BSNT_01048___ 1 ATGGCAAAAGAAATTAAGTTTAGTGAAGAAGCTCGCCGCGCAATGCTTCG 50
|||||||||||.||||||||.|||||||||||.||.|||||.|||.|.||
BPUM_0535___g 1 ATGGCAAAAGATATTAAGTTCAGTGAAGAAGCACGTCGCGCGATGTTACG 50
BSNT_01048___ 51 CGGTGTCGATGCACTTGCTGATGCTGTTAAAGTAACTTTAGGACCAAAAG 100
.|||||.|||||||||||.||||||||.|||||.|||||||||||.||||
BPUM_0535___g 51 TGGTGTAGATGCACTTGCAGATGCTGTAAAAGTCACTTTAGGACCTAAAG 100
BSNT_01048___ 101 GACGCAACGTGGTTCTAGAGAAAAAATTCGGTTCTCCGTTAATCACAAAT 150
||||.|||||.||||||||||||||||||||||||||..|.||||||||.
BPUM_0535___g 101 GACGTAACGTAGTTCTAGAGAAAAAATTCGGTTCTCCACTTATCACAAAC 150
BSNT_01048___ 151 GACGGTGTAACAATCGCTAAAGAAATCGAGCTTGAAGATGCGTTTGAAAA 200
||.||||||||.||.||.|||||||||||..|.||||||||.||||||||
BPUM_0535___g 151 GATGGTGTAACGATTGCAAAAGAAATCGAATTAGAAGATGCATTTGAAAA 200
BSNT_01048___ 201 CATGGGTGCGAAGCTTGTAGCTGAAGTAGCCAGCAAAACAAACGACGTTG 250
||||||||||||.|||||.||||||||.||.|||||||||||||||||.|
BPUM_0535___g 201 CATGGGTGCGAAACTTGTGGCTGAAGTTGCAAGCAAAACAAACGACGTAG 250
BSNT_01048___ 251 CCGGTGACGGTACAACAACTGCGACAGTTCTTGCGCAAGCAATGATCCGT 300
|.||||||||||||||||||||.||||||||.||.|||||.|||||||||
BPUM_0535___g 251 CTGGTGACGGTACAACAACTGCAACAGTTCTAGCTCAAGCGATGATCCGT 300
BSNT_01048___ 301 GAAGGCCTTAAAAACGTAACAGCGGGCGCTAACCCTGTAGGCGTGCGTAA 350
|||||.|||||||||||||||||.||.||.||||||||.|||||.|||||
BPUM_0535___g 301 GAAGGTCTTAAAAACGTAACAGCTGGTGCAAACCCTGTTGGCGTTCGTAA 350
BSNT_01048___ 351 AGGGATGGAACAAGCTGTAGCGGTTGCGATCGAAAACTTAAAAGAAATTT 400
||||||.|||.||||.||....||.||..|.|||..|||..|.||.||||
BPUM_0535___g 351 AGGGATTGAAGAAGCAGTGAAAGTAGCTCTTGAAGGCTTGCACGAGATTT 400
BSNT_01048___ 401 CTAAGCCAATCGAAGGCAAAGAGTCTATCGCTCAGGTTGCTGCGATCTCT 450
||||.|||||||||||||||||.||.||.|||||.|||||..|.||.|||
BPUM_0535___g 401 CTAAACCAATCGAAGGCAAAGAATCAATTGCTCAAGTTGCGTCTATTTCT 450
BSNT_01048___ 451 GCTGCTGATGAGGAAGTCGGAAGCCTTATCGCTGAAGCAATGGAGCGCGT 500
||.||.|||||.|||||.||||||||.||.|||||||||||||||||.||
BPUM_0535___g 451 GCAGCAGATGAAGAAGTTGGAAGCCTAATTGCTGAAGCAATGGAGCGTGT 500
BSNT_01048___ 501 AGGAAACGACGGCGTTATCACAATCGAAGAGTCTAAAGGCTTCACAACTG 550
|||.|||||||||||.||||||||||||||.||||||||.||||||||||
BPUM_0535___g 501 AGGTAACGACGGCGTGATCACAATCGAAGAATCTAAAGGATTCACAACTG 550
BSNT_01048___ 551 AGCTTGAAGTTGTTGAAGGTATGCAATTCGACCGCGGATATGCGTCTCCT 600
||||||||||.||||||||.|||||.||.||||||||||||||.||.||.
BPUM_0535___g 551 AGCTTGAAGTGGTTGAAGGAATGCAGTTTGACCGCGGATATGCTTCACCA 600
BSNT_01048___ 601 TACATGGTAACTGACTCTGATAAGATGGAAGCGGTTCTTGACAATCCTTA 650
||||||||.||.||.|||||||||||||||||.||||||||.||||||||
BPUM_0535___g 601 TACATGGTGACGGATTCTGATAAGATGGAAGCAGTTCTTGAAAATCCTTA 650
BSNT_01048___ 651 CATCTTAATCACAGACAAAAAAATCACAAACATTCAAGAAATCCTTCCTG 700
||||||||||||.||.|||||.||||||||||||||||||||||||||.|
BPUM_0535___g 651 CATCTTAATCACTGATAAAAAGATCACAAACATTCAAGAAATCCTTCCAG 700
BSNT_01048___ 701 TGCTTGAGCAGGTTGTTCAGCAAGGCAAACCATTGCTTCTGATCGCTGAG 750
|.||||||||.|||||.||.|||||.||||||||..|.||.||.|||||.
BPUM_0535___g 701 TACTTGAGCAAGTTGTACAACAAGGAAAACCATTATTGCTCATTGCTGAA 750
BSNT_01048___ 751 GATGTTGAAGGCGAAGCACTTGCAACACTTGTTGTGAACAAACTTCGCGG 800
|||||.||||||||||||||||||||.||||||||||||||||||||.||
BPUM_0535___g 751 GATGTAGAAGGCGAAGCACTTGCAACTCTTGTTGTGAACAAACTTCGTGG 800
BSNT_01048___ 801 CACATTCAACGCAGTTGCTGTTAAAGCTCCTGGCTTCGGTGACCGCCGTA 850
.||||||||||||||.||.||.|||||.|||||.||||||||.||.||||
BPUM_0535___g 801 AACATTCAACGCAGTGGCAGTAAAAGCACCTGGATTCGGTGATCGTCGTA 850
BSNT_01048___ 851 AAGCAATGCTTGAAGACATCGCTGTCCTTACTGGCGGAGAAGTCATCACA 900
||||.||||||||.||||||.||||.||.|||||||||||..|.||||||
BPUM_0535___g 851 AAGCTATGCTTGAGGACATCTCTGTTCTAACTGGCGGAGAGTTAATCACA 900
BSNT_01048___ 901 GAAGATCTTGGCCTTGACCTGAAATCTACTCAAATCGCTCAATTGGGACG 950
|||||.||.||.||||||||.|||||.|||.||||||.|||..|.||.||
BPUM_0535___g 901 GAAGACCTAGGACTTGACCTAAAATCAACTGAAATCGGTCAGCTTGGCCG 950
BSNT_01048___ 951 CGCTTCTAAAGTTGTCGTTACTAAAGAAAACACAACAATCGTTGAAGGCG 1000
|||.||||||||.||.||.||.||||||||||||||.|||||.||||||.
BPUM_0535___g 951 CGCGTCTAAAGTCGTTGTGACAAAAGAAAACACAACCATCGTAGAAGGCT 1000
BSNT_01048___ 1001 CTGGCGAAACAGACAAAATTTCTGCCCGCGTGACTCAAATCCGCGCTCAA 1050
|.||.||..|.|...||||..|.||.||.||||..||||||||.||.|||
BPUM_0535___g 1001 CAGGAGATTCTGCTCAAATCGCAGCACGTGTGAACCAAATCCGTGCACAA 1050
BSNT_01048___ 1051 GTGGAAGAAACAACTTCTGAATTCGACAGAGAAAAATTACAAGAGCGTCT 1100
||.|||||||||||||||||||||||.|.|||||||||||||||.|||||
BPUM_0535___g 1051 GTTGAAGAAACAACTTCTGAATTCGATAAAGAAAAATTACAAGAACGTCT 1100
BSNT_01048___ 1101 TGCTAAACTTGCTGGCGGCGTAGCTGTCATCAAAGTCGGCGCTGCGACTG 1150
|||||||||.|||||.|||||.||||||||||||||.||.|||||.||||
BPUM_0535___g 1101 TGCTAAACTAGCTGGTGGCGTCGCTGTCATCAAAGTTGGTGCTGCAACTG 1150
BSNT_01048___ 1151 AAACTGAACTGAAAGAGCGTAAACTTCGCATCGAAGACGCCCTGAACTCA 1200
||||.|||||.||||||||||||||.||||||||.||.||.||.||||||
BPUM_0535___g 1151 AAACAGAACTAAAAGAGCGTAAACTACGCATCGAGGATGCACTCAACTCA 1200
BSNT_01048___ 1201 ACTCGCGCAGCTGTTGAAGAAGGCATCGTATCCGGTGGTGGTACAGCGCT 1250
|||||.|||||.|||||||||||.|||||.|||||||||||||||||.||
BPUM_0535___g 1201 ACTCGTGCAGCAGTTGAAGAAGGTATCGTTTCCGGTGGTGGTACAGCACT 1250
BSNT_01048___ 1251 TGTAAACGTATATAATAAAGTCGCTGCAGTTGAAGCTGAAGGCGATGCTC 1300
|||.||.|||||.||.|||||||||.||.|.|||||.||.||.||.|.||
BPUM_0535___g 1251 TGTGAATGTATACAAAAAAGTCGCTTCAATCGAAGCAGATGGTGACGTTC 1300
BSNT_01048___ 1301 AAACAGGTATCAACATCGTGCTTCGCGCGCTTGAAGAGCCAATCCGTCAA 1350
||||||||.|.||||||||.||.||..|.||||||||||||||.||||||
BPUM_0535___g 1301 AAACAGGTGTGAACATCGTTCTACGTTCTCTTGAAGAGCCAATTCGTCAA 1350
BSNT_01048___ 1351 ATCGCACACAATGCTGGTCTTGAAGGATCTGTCATCGTTGAACGCCTCAA 1400
|||||.|||||.||.||||||||||||||.|||||||||||.|||.|.||
BPUM_0535___g 1351 ATCGCTCACAACGCAGGTCTTGAAGGATCAGTCATCGTTGAGCGCTTGAA 1400
BSNT_01048___ 1401 AAACGAAGAAATCGGCGTAGGCTTCAACGCTGCAACTGGCGAATGGGTAA 1450
||||||||||||.|||||||||||||||||.|||||...|||||||||||
BPUM_0535___g 1401 AAACGAAGAAATTGGCGTAGGCTTCAACGCAGCAACAAACGAATGGGTAA 1450
BSNT_01048___ 1451 ACATGATCGAAAAAGGTATCGTTGACCCAACGAAAGTTACACGCTCAGCT 1500
||||||||||||||||.||||||||||||||.|||||.||.|||||.||.
BPUM_0535___g 1451 ACATGATCGAAAAAGGAATCGTTGACCCAACAAAAGTAACTCGCTCTGCA 1500
BSNT_01048___ 1501 CTTCAAAACGCTGCGTCTGTAGCTGCAATG-TTCTTAACAACTGAAGCCG 1549
|||||||||||.||.|||||.||.|||||| ||| |||||||||||||.|
BPUM_0535___g 1501 CTTCAAAACGCAGCTTCTGTTGCAGCAATGCTTC-TAACAACTGAAGCAG 1549
BSNT_01048___ 1550 TTGTCGCTGACAAGCCAGAAGAAAACG---CTGGCGGCGGAATGCCTGAT 1596
|.||.||||||||.|||||||||..|| |.||||||||||||||.|||
BPUM_0535___g 1550 TCGTTGCTGACAAACCAGAAGAAGGCGGCTCAGGCGGCGGAATGCCAGAT 1599
BSNT_01048___ 1597 ATGGGCGGCATGGGCGGTATGGGCGGAATGATGTAA 1632
|||||||||||||||||||||||.||||||||||||
BPUM_0535___g 1600 ATGGGCGGCATGGGCGGTATGGGTGGAATGATGTAA 1635
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