Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01099 and BPUM_0594
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:43
# Commandline: needle
# -asequence dna-align/BSNT_01099___yebE.1.24716.seq
# -bsequence dna-align/BPUM_0594___yebE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01099___yebE-BPUM_0594___yebE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01099___yebE-BPUM_0594___yebE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01099___yebE
# 2: BPUM_0594___yebE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 638
# Identity: 418/638 (65.5%)
# Similarity: 418/638 (65.5%)
# Gaps: 94/638 (14.7%)
# Score: 1497.5
#
#
#=======================================
BSNT_01099___ 0 -------------------------------------------------- 0
BPUM_0594___y 1 TTGTATCAAGGTATGTTCTCTAGTAGAATATGGGGTGCTTTATTTGATTT 50
BSNT_01099___ 1 -------------------ATGATGC--AAACCA-TCTTATCAAATGGGA 28
||..||| .|||.| |.|||||.||||.|.
BPUM_0594___y 51 TTTAGTGCAGGGGGTTCGAATCGTGCTTCAACAACTTTTATCCAATGCGT 100
BSNT_01099___ 29 TAGCCATGGTTCTCATAATTCTCATTATTAATATTGTCTATGTGTCATTT 78
|..||||||||.|.||.|||.|..|.|||||||||||||||||.||.|||
BPUM_0594___y 101 TCACCATGGTTTTGATCATTTTAGTGATTAATATTGTCTATGTCTCTTTT 150
BSNT_01099___ 79 TTTACGATAAGAATGATTTTAACGCTGAAAGGACAG-CGTTA-------- 119
|..||.||..|..||||||||||..||||||| ||| ||.||
BPUM_0594___y 151 TCCACCATGCGTTTGATTTTAACAATGAAAGG-CAGACGGTACGCAGCAG 199
BSNT_01099___ 120 -TTTAGCGGCCGGCATCAGTACGATTGAAATACTGGTTTATGTGACGGGG 168
|||.||.| ||||||||||.||.|||.|||||||||..||.
BPUM_0594___y 200 CTTTTGCTG---------GTACGATTGAGATGCTGATTTATGTGATTGGA 240
BSNT_01099___ 169 CTGAGTCTGGTGCTCGATAACTTAGACCAGATTCAAAATGTGATCGCGTA 218
.|.|||.|.||.||.|||||||||||.||.||.||||||||.||.|||||
BPUM_0594___y 241 TTAAGTATCGTACTTGATAACTTAGATCAAATCCAAAATGTTATTGCGTA 290
BSNT_01099___ 219 CGCGCTCGGTTACGGTCTTGGCGTAATTGTCGGCATGAAAATAGAAGAAA 268
.|||||.|||||.||..|.||..|.||||||||.||||||||.|||||.|
BPUM_0594___y 291 TGCGCTAGGTTATGGGATGGGGATCATTGTCGGGATGAAAATTGAAGAGA 340
BSNT_01099___ 269 AATTGGCGCTTGGCTATATTATGGTCAATGTGATTACGAAGGAGCTCGAT 318
|..||||.||||||||.|..|..||.||.|||||.||.||.||..|.|||
BPUM_0594___y 341 AGCTGGCACTTGGCTACACAACTGTTAACGTGATCACAAAAGAATTAGAT 390
BSNT_01099___ 319 CTTGATCTTCCGAAG-CAGCTCCGTGAAAAAGGCTACGGCGTGACAAATT 367
.|.|||| |||.||| ||..|..|.||||||||.||.||.||.||.|..|
BPUM_0594___y 391 GTCGATC-TCCCAAGACAATTGAGAGAAAAAGGATATGGTGTCACTAGCT 439
BSNT_01099___ 368 GGGTGGCAGGCGGGCTTGAAGGCGACCGCACAGCCCTTCAGATCCTGACG 417
||||.||||||||.||||||||.|||||.|||||..|.||.||..|.||.
BPUM_0594___y 440 GGGTAGCAGGCGGTCTTGAAGGAGACCGGACAGCATTGCAAATTTTAACA 489
BSNT_01099___ 418 CCGAGAAGATATGAACTCCAGCTATATGATACGATTAAAACACTTGATTC 467
|||||||.|||||||||.||..|||||||.|||||||||||.||.|||||
BPUM_0594___y 490 CCGAGAAAATATGAACTGCAATTATATGAAACGATTAAAACGCTGGATTC 539
BSNT_01099___ 468 AAAAGCCTTTATTATTGCGTACGAACCAAAAACAATCCACGGCGGCTTCT 517
|||.||.|||||.|||.|.||.||.||.|||.|.||.|||||||||||||
BPUM_0594___y 540 AAAGGCATTTATCATTTCATATGAGCCCAAATCGATTCACGGCGGCTTCT 589
BSNT_01099___ 518 GGGTCAAAGCGGTGAAGAAGAGGAGAATTAAAGAATAA 555
||||.||.||.||||||||.||||||||||||||||.|
BPUM_0594___y 590 GGGTGAAGGCTGTGAAGAAAAGGAGAATTAAAGAATGA 627
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