Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01100 and BPUM_0595
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:43
# Commandline: needle
# -asequence dna-align/BSNT_01100___yebG.1.24716.seq
# -bsequence dna-align/BPUM_0595___yebG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01100___yebG-BPUM_0595___yebG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01100___yebG-BPUM_0595___yebG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01100___yebG
# 2: BPUM_0595___yebG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 204
# Identity: 155/204 (76.0%)
# Similarity: 155/204 (76.0%)
# Gaps: 9/204 ( 4.4%)
# Score: 544.0
#
#
#=======================================
BSNT_01100___ 1 ATG---GCAAAGCCGAAGAAGAAAAAGTTTGAAGTGACAGAGCAGCA-AA 46
||| |||||.||.||||||||.||.||..|.|||..||| ||.|| .|
BPUM_0595___y 1 ATGACCGCAAAACCAAAGAAGAAGAAATTCTATGTGGAAGA-CAACATGA 49
BSNT_01100___ 47 CGATTGATGCGGTGCT-TCAGCAAATGAAAGAAGAAGGATATCT-GCCTG 94
||||.|||...|||.| || .||.|||..||..|||||.|| || |||||
BPUM_0595___y 50 CGATCGATCAAGTGTTGTC-CCAGATGGCAGCGGAAGGCTA-CTCGCCTG 97
BSNT_01100___ 95 TAAGGCGAATGGAAGAGCCTATTTTTATGGAAAAAAAGGAAAATGGGTCA 144
|..|.||||||||.|||||.||||||..||||||.||||||||||||||.
BPUM_0595___y 98 TCCGACGAATGGAGGAGCCCATTTTTCAGGAAAAGAAGGAAAATGGGTCG 147
BSNT_01100___ 145 ATTCAGATCGTTCCGTGCGGGAAAAAAATCGTATTTGAAGGGAAATTGAT 194
|||||||||.|||||...|||||||||||||||||||||||.|||.|..|
BPUM_0595___y 148 ATTCAGATCATTCCGATTGGGAAAAAAATCGTATTTGAAGGAAAAATAGT 197
BSNT_01100___ 195 CTAA 198
||||
BPUM_0595___y 198 CTAA 201
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