Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01109 and BPUM_0603

See Amino acid alignment / Visit BSNT_01109 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:44
# Commandline: needle
#    -asequence dna-align/BSNT_01109___purF.1.24716.seq
#    -bsequence dna-align/BPUM_0603___purF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01109___purF-BPUM_0603___purF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01109___purF-BPUM_0603___purF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01109___purF
# 2: BPUM_0603___purF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1438
# Identity:    1127/1438 (78.4%)
# Similarity:  1127/1438 (78.4%)
# Gaps:          14/1438 ( 1.0%)
# Score: 4364.0
# 
#
#=======================================

BSNT_01109___      1 ATGCTTGCTGAAATCAAAGGCTTAAATGAAGAATGCGGCGTTTTTGGGAT     50
                     ||||||||||||||||.|||||||||||||||.||.||.||.||||||.|
BPUM_0603___p      1 ATGCTTGCTGAAATCAGAGGCTTAAATGAAGAGTGTGGTGTCTTTGGGGT     50

BSNT_01109___     51 TTGGGGACATGAAGAAGCCCCGCAAATCACGTATTACGGTCTCCACAGCC    100
                     |||||||||.|||||||||||.||||||||.||||||||..|.||.||||
BPUM_0603___p     51 TTGGGGACACGAAGAAGCCCCACAAATCACATATTACGGATTGCATAGCC    100

BSNT_01109___    101 TTCAGCACCGAGGACAGGAGGGTGCGGGCATCGTAGCGACTGATGGTGAA    150
                     ||||||||||||||||.||.||||||||||||.|.||.||.||||||||.
BPUM_0603___p    101 TTCAGCACCGAGGACAAGAAGGTGCGGGCATCATTGCAACAGATGGTGAG    150

BSNT_01109___    151 AAGCTGACGGCTCACAAAGGCCAAGGTCTGATCACTGAAGTATTTCAAAA    200
                     ||.||||||.|.||||||||||..||.|||||.||.|||||.||||||||
BPUM_0603___p    151 AACCTGACGTCACACAAAGGCCTTGGACTGATTACGGAAGTCTTTCAAAA    200

BSNT_01109___    201 CGGCGAACTCAGCAAAG----TAAAGGGAAAAGGCGCTATCGGGCACGTT    246
                     |||.||.||    ||||    |.||.||||||||.||.||.||.||||||
BPUM_0603___p    201 CGGTGAGCT----AAAGGATTTGAAAGGAAAAGGTGCGATTGGACACGTT    246

BSNT_01109___    247 CGGTACGCAACGGCTGGAGGCGGCGGATACGAAAATGTTCAGCCGCTCCT    296
                     .||||.||.||.||.||.||.|||||.|..||||||||.|||||.|||.|
BPUM_0603___p    247 AGGTATGCGACAGCAGGCGGAGGCGGCTTTGAAAATGTGCAGCCCCTCTT    296

BSNT_01109___    297 CTTCCGTTCCCAAAACAATGGCAGCCTGGCGCTTGCTCATAACGGAAATC    346
                     |||||||||.|||||||||||||||||.||.|||||||||||.||||| |
BPUM_0603___p    297 CTTCCGTTCGCAAAACAATGGCAGCCTTGCCCTTGCTCATAATGGAAA-C    345

BSNT_01109___    347 TT-GTCAACGCCACTCAGCTGAAGCAGCAGCTCGAAAATCAAGGGAGCAT    395
                     || ||.||.||.||.|||.|.|||||||||||.|||||.||||||||.||
BPUM_0603___p    346 TTAGTGAATGCAACACAGTTAAAGCAGCAGCTAGAAAACCAAGGGAGTAT    395

BSNT_01109___    396 CTTTCAAACCTCTTCGGATACAGAGGTTTTGGCTCACCTGATCAAAAGAA    445
                     .||.||.||||||||.|||||.||.||..|.|||||..|.||.||..|.|
BPUM_0603___p    396 TTTCCAGACCTCTTCTGATACCGAAGTGCTCGCTCATTTAATTAAGCGCA    445

BSNT_01109___    446 GCGGACACTTCACGCTGAAGGACCAAATTAAAAACTCGCTTTCTATGCTG    495
                     ||||.||..|.....|.||.||.||.||.|||||..|.||.||||||||.
BPUM_0603___p    446 GCGGGCATATGGAATTAAAAGAGCAGATCAAAAATGCACTGTCTATGCTT    495

BSNT_01109___    496 AAAGGCGCCTACGCGTTCCTGATCATGACCGAAACAGAAATGATTGTCGC    545
                     ||.||.|||||.||.|||.|.||||||||.||.|||||||||||.||.||
BPUM_0603___p    496 AAGGGAGCCTATGCTTTCTTAATCATGACGGAGACAGAAATGATCGTGGC    545

BSNT_01109___    546 ACTTGATCCAAACGGGCTGA-GACCGCTATCCATCGGCATGATGGGCGAC    594
                     .||||||||.||| ||||.| |.|||||.||..|.||.|||.|.||.||.
BPUM_0603___p    546 GCTTGATCCGAAC-GGCTTACGTCCGCTTTCACTTGGTATGCTTGGGGAT    594

BSNT_01109___    595 GCTTATGTGGTCGCATCAGAAACATGCGCATTTGACGTCGTCGGCGCAAC    644
                     ||||||||.|||||.||.||||||||.||||||||.||||||||.||.||
BPUM_0603___p    595 GCTTATGTTGTCGCTTCTGAAACATGTGCATTTGATGTCGTCGGTGCCAC    644

BSNT_01109___    645 GTACCTTCGTGAGGTAGAGCCGGGAGAAATGCTGATCATTAATGATGAAG    694
                     |||..|.|||||.||.|||||.||.|||||||||||||||||||||||||
BPUM_0603___p    645 GTATTTACGTGATGTGGAGCCTGGCGAAATGCTGATCATTAATGATGAAG    694

BSNT_01109___    695 GAATGAAATCAGAGCGTTTTTCCATGAATATCAACCGTTCCATTTGCAGC    744
                     |..|.|||||.|||||.||.||.|||||.||.|||||...|||.||||||
BPUM_0603___p    695 GCCTCAAATCTGAGCGCTTCTCGATGAACATTAACCGCAGCATGTGCAGC    744

BSNT_01109___    745 ATGGAGTACATTTATTTCTCCAGACCAGACAGCAATATTGACGGTATTAA    794
                     |||||.||||||||||||||.|||||.|||||.||||||.|||||||.||
BPUM_0603___p    745 ATGGAATACATTTATTTCTCAAGACCTGACAGTAATATTAACGGTATCAA    794

BSNT_01109___    795 CGTACACAGTGCCCGTAAAAACCTTGGGAAAATGCTGGCTCAGGAATCCG    844
                     .||.||.|||||..|.||.|..|||||.||||..||.|||.|.||| .||
BPUM_0603___p    795 TGTGCATAGTGCGAGAAAGAGTCTTGGCAAAAAACTTGCTGAAGAA-GCG    843

BSNT_01109___    845 CA-GTTGAAGCTGACGTCGTAACCGGGGTTCCGGATTCCAGTATTTCTGC    893
                     || ||.|||||.||.||.||.||.||.||.||.|||||||||||.|||||
BPUM_0603___p    844 CATGTCGAAGCAGATGTTGTGACAGGTGTACCAGATTCCAGTATATCTGC    893

BSNT_01109___    894 GGCGATCGGCTATGCAGAGGCAACAGGCATTCCGTATGAGCTCGGTTTAA    943
                     .|||||.||.|||||.||.||||||||.||||||||||||||.|||||.|
BPUM_0603___p    894 AGCGATTGGATATGCCGAAGCAACAGGTATTCCGTATGAGCTTGGTTTGA    943

BSNT_01109___    944 TCAAAAACCGCTATGTCGGCAGAACGTTTATTCAGCCGTCCCAGGCTCTG    993
                     |.||||||||.|||||||||.|.||||||||.||||||||.||.||..|.
BPUM_0603___p    944 TTAAAAACCGTTATGTCGGCCGGACGTTTATCCAGCCGTCTCAAGCATTA    993

BSNT_01109___    994 CGTGAGCAAGGCGTCAGAATGAAGCTGTCTGCGGTGCGCGGGGTTGTAGA   1043
                     ||.|||||.|||||..|.||||||||||||||.||.|||||.||.||.||
BPUM_0603___p    994 CGCGAGCAGGGCGTACGGATGAAGCTGTCTGCTGTACGCGGTGTAGTCGA   1043

BSNT_01109___   1044 AGGCAAACGCGTCGTGATGGTGGATGACTCTATCGTGCGCGGAACAACTA   1093
                     |||.||.||.||.||||||||||||||.||.|||||.|||||.|||||.|
BPUM_0603___p   1044 AGGAAAGCGTGTTGTGATGGTGGATGATTCCATCGTACGCGGTACAACGA   1093

BSNT_01109___   1094 GCCGCCGGATTGTCACGATGCTAAGAGAAGCGGGTGCGACAGAGGTGCAT   1143
                     |||||.|.||||||||||||||.|||||||||||||||||.||.||.||.
BPUM_0603___p   1094 GCCGCAGAATTGTCACGATGCTCAGAGAAGCGGGTGCGACGGAAGTCCAC   1143

BSNT_01109___   1144 GTGAAAATCAGTTCACCGCCGATCGCTCATCCGTGCTTTTACGGCATTGA   1193
                     ||....||.|||||||||||.|||||.|||||.||.|||||.||.|||||
BPUM_0603___p   1144 GTACGCATTAGTTCACCGCCAATCGCACATCCATGTTTTTATGGAATTGA   1193

BSNT_01109___   1194 CACTTCCACACATGAAGAACTGATCGCGTCTTCGCATTCTGTTGAAGAAA   1243
                     .||.||||||||.|||||.|||||.||.|||||.|||||.||.|||||.|
BPUM_0603___p   1194 TACATCCACACACGAAGAGCTGATTGCTTCTTCTCATTCAGTGGAAGAGA   1243

BSNT_01109___   1244 TCCGTCAGGAAATCGGAGCCGATACCCTCTCATTTTTGAGTGTGGAAGGG   1293
                     |..|.|||||||||||.||.||..||.|..|||||||...|||.||.||.
BPUM_0603___p   1244 TTAGACAGGAAATCGGTGCAGACTCCATTGCATTTTTATCTGTAGACGGT   1293

BSNT_01109___   1294 CTGCTGAAAGGCATCGGCAGAAAATACGATGACTCGAATTGCGGACAGTG   1343
                     .|..||.|.||.||.|||||.||.||.|||||..||.|..||||.|||||
BPUM_0603___p   1294 TTAATGGACGGGATTGGCAGGAAGTATGATGATCCGCAGCGCGGTCAGTG   1343

BSNT_01109___   1344 TCTCGCTTGCTTTACAGGAAAATATCCGACTGAAATTTACCAGGATACAG   1393
                     |.|.||.||||||||.||||||||.||.||||||||.||..|.|||||.|
BPUM_0603___p   1344 TTTAGCATGCTTTACTGGAAAATACCCAACTGAAATATATGAAGATACGG   1393

BSNT_01109___   1394 TGCTTCCTCACGTAAAAGAAGCAGTATTAACCAAATAA   1431
                     |.|||||.||.||.||.|||.|.||.||.||.||||||
BPUM_0603___p   1394 TTCTTCCGCATGTGAAGGAAACGGTCTTGACGAAATAA   1431


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