Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01141 and BPUM_0642
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:46
# Commandline: needle
# -asequence dna-align/BSNT_01141___sapB.1.24716.seq
# -bsequence dna-align/BPUM_0642___sapB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01141___sapB-BPUM_0642___sapB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01141___sapB-BPUM_0642___sapB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01141___sapB
# 2: BPUM_0642___sapB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 713
# Identity: 509/713 (71.4%)
# Similarity: 509/713 (71.4%)
# Gaps: 40/713 ( 5.6%)
# Score: 1757.0
#
#
#=======================================
BSNT_01141___ 1 ----TTGAGCTGGTATATTGATCCTGATATTTTATTGAAATTGGGCATTG 46
|| |||...|||||....||||...|.||.||.||.|.|.|.|
BPUM_0642___s 1 ATGTTT----TGGACGATTGAATGGGATACAGTCTTAAAGTTAGCCGTGG 46
BSNT_01141___ 47 CCACATTGATTGGCATGGTCATCGGGCTTGAACGCGAATTAAAAAATAAG 96
||||.||.||.||..||.|.||.|||||.|||||.||..|.||.||.|||
BPUM_0642___s 47 CCACCTTAATCGGTTTGATTATTGGGCTCGAACGAGAGCTGAAGAAAAAG 96
BSNT_01141___ 97 CCGCTCGGATTAAAAACCTGTATTGTCATTGCAGTCAGCTCATGCATGCT 146
||||||||.||||||||.||||||||||||||.||||||||.|||.||.|
BPUM_0642___s 97 CCGCTCGGCTTAAAAACGTGTATTGTCATTGCTGTCAGCTCCTGCGTGTT 146
BSNT_01141___ 147 GACGATCGTCAGTATTAATGCGGCATATCATTTCCCTAAATACTACC--- 193
.||.|||.||||.|||.||||.||.||..||||||||..|..|| |
BPUM_0642___s 147 AACCATCATCAGCATTGATGCAGCCTACAATTTCCCTCGAGTCT--CTAG 194
BSNT_01141___ 194 GCATCATGATGGATCCGCTTCGTCTGCCGGCACAAATCATCTCCGGCGTC 243
||.||| .|||||.||.||..|..|.|||||.|||||.||.||.||.||.
BPUM_0642___s 195 GCTTCA-AATGGACCCACTCAGGTTACCGGCGCAAATTATATCTGGTGTT 243
BSNT_01141___ 244 GGGTTTATCGGAGCCGGTGTCATCCTGCGAAAAAGCAATGATGTCATTTC 293
||.|||||.|||||.|||||.||.|||||||||||||||||||||||.||
BPUM_0642___s 244 GGTTTTATTGGAGCAGGTGTGATTCTGCGAAAAAGCAATGATGTCATCTC 293
BSNT_01141___ 294 CGGCCTGACGACATCGGCCATGATCTGGGGGGCAGCGGGGCTCGGGCTTG 343
.||.||.|||||.||.||.|||||||||||.|||||.||.||.|||.|||
BPUM_0642___s 294 AGGTCTCACGACTTCTGCGATGATCTGGGGAGCAGCAGGACTTGGGGTTG 343
BSNT_01141___ 344 CTACGGGAGCCGGTTTTTATAAAGAAGCGTTTGCCAGTCTTCTGTTCATC 393
|.||.||.||.||.||||||||||||||.||...|||||||.|.||.||.
BPUM_0642___s 344 CAACAGGGGCAGGATTTTATAAAGAAGCCTTCCTCAGTCTTTTCTTTATT 393
BSNT_01141___ 394 CTGATCAGCGTGGAATTTCTCCCATGGGTGGT-CAGAAAAATCGGCCCCG 442
|||||.||.||.||||||||.||.|||.|..| ||| |||....|
BPUM_0642___s 394 CTGATTAGTGTCGAATTTCTACCGTGGCTCTTCCAG------CGGATTGG 437
BSNT_01141___ 443 AC-----CGCCTGCAGGAAAAAGACATCCGCATCAGAATGTCGCTTTCTG 487
|| |||.|.|||||||||||.|||||||||||||||||.|||||||
BPUM_0642___s 438 ACCGATTCGCTTACAGGAAAAAGAAATCCGCATCAGAATGTCTCTTTCTG 487
BSNT_01141___ 488 ATAAAGACAAAATGACAGAGATTTTAAAAGAAATGAAAAGAAGAGATATC 537
||..|.||...|||||.||.||.|||||||||||||| ||...||
BPUM_0642___s 488 ATCGAAACCGTATGACGGATATCTTAAAAGAAATGAA------AGCCCTC 531
BSNT_01141___ 538 AA----AGCA--CACTCCGTTCGGATCGACGACCTGGGCGAAAAGGATTT 581
|| .||| ||.||.|||||.||.||.||..|....||||||.|.|.
BPUM_0642___s 532 AATATTCGCATTCATTCTGTTCGTATTGATGATTTAACAGAAAAGAACTA 581
BSNT_01141___ 582 TCCAATTATGGAAGTGAAG-GTCCGCGTCCATAAAAACAGATACACGACC 630
.||.||||||||||| |.| ||.|||||.||||||.|..|.||.||.||.
BPUM_0642___s 582 CCCGATTATGGAAGT-ACGTGTACGCGTGCATAAAGATCGCTATACAACT 630
BSNT_01141___ 631 GATGTCTACTATGACATTAAAGCCATTGAAGGCGTAGTCGGCGTGAAGTG 680
|||||.||.|.|||.|||||||...|.||||||||.||.|||||.|||||
BPUM_0642___s 631 GATGTGTATTTTGATATTAAAGATCTAGAAGGCGTCGTTGGCGTCAAGTG 680
BSNT_01141___ 681 TGATACATTATAA 693
||||||..|||||
BPUM_0642___s 681 TGATACGGTATAA 693
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