Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01151 and BPUM_0650
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:48
# Commandline: needle
# -asequence dna-align/BSNT_01151___yerQ.1.24716.seq
# -bsequence dna-align/BPUM_0650___yerQ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01151___yerQ-BPUM_0650___yerQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01151___yerQ-BPUM_0650___yerQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01151___yerQ
# 2: BPUM_0650___yerQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 930
# Identity: 683/930 (73.4%)
# Similarity: 683/930 (73.4%)
# Gaps: 39/930 ( 4.2%)
# Score: 2471.0
#
#
#=======================================
BSNT_01151___ 1 ATGAAACGTGCACGCATAATATACAATCCGACTTCAGGACGGGAGATCTT 50
|||||||||||.||.||.||||||||||||||.||.||.||.||.|||||
BPUM_0650___y 1 ATGAAACGTGCTCGAATTATATACAATCCGACATCTGGGCGTGAAATCTT 50
BSNT_01151___ 51 TAAAAAGCATCTTGCC-CAGGTCCTGCAAAAATTTGAACAAGCCGGCTAT 99
.||.|||.|| ||||| |||||..|||||||||||||||||||.||||||
BPUM_0650___y 51 CAAGAAGAAT-TTGCCGCAGGTTTTGCAAAAATTTGAACAAGCTGGCTAT 99
BSNT_01151___ 100 GAAACCTCCACCCATGCGACGACATGCGCAGGAGACGCTACACACGCTGC 149
|||||.||....|||||.||||||||.||||||||.||.|||||.||.||
BPUM_0650___y 100 GAAACATCTTGTCATGCAACGACATGTGCAGGAGATGCGACACAAGCAGC 149
BSNT_01151___ 150 CAAGGAAGCGGCATTGCGTGAGTTTGACCTGATCATTGCGGCAGGCGGAG 199
..|..|.||.|||..|.|.||.|||||..|.||..|.||.|||||.||||
BPUM_0650___y 150 TGAAAATGCCGCACAGAGAGACTTTGATTTAATTGTAGCAGCAGGTGGAG 199
BSNT_01151___ 200 ACGGAACGATTAATGAGGTCGTCAACGGGCTTGCGCCTTTAGACAACCGT 249
||||.|||||||||||.|||||||||||.||.||.||..|.||.||..|.
BPUM_0650___y 200 ACGGCACGATTAATGAAGTCGTCAACGGACTAGCCCCGCTTGAAAAAAGA 249
BSNT_01151___ 250 CCGACACTCGGTGTGATTCCAGTCGGCACAACAAACGACTTCGCCAGAGC 299
||.|.|||.||..|.|||||.||.||.||||||||.||||||||.|||||
BPUM_0650___y 250 CCAAAACTAGGAATTATTCCGGTTGGAACAACAAATGACTTCGCAAGAGC 299
BSNT_01151___ 300 GCTCGGAATCCCACGCGAGGATATTTTAAAAGCGGCAGATACGGTCATTA 349
.||.||.||.|||||.||.|.|.||||||||||..||||| |.|||||
BPUM_0650___y 300 ACTTGGCATTCCACGAGAAGGTGTTTTAAAAGCAACAGAT---GCCATTA 346
BSNT_01151___ 350 ---ACGGCGTTGC----CCGCCCGATCGATATCGGACAGGTCAACGGCCA 392
|.||.||.|| |||| |.||||||||..|.|||||.|||||
BPUM_0650___y 347 TAGAGGGTGTAGCGAAGCCGC----TTGATATCGGTAAAGTCAATGGCCA 392
BSNT_01151___ 393 GTATTTTATCAATATCGCCGGAGGAGGCCGTCTGACGGAGCTGACGTACG 442
.||||||||.|||||.||.|||||.||.||..|.||.|||||.||.||.|
BPUM_0650___y 393 TTATTTTATTAATATTGCAGGAGGCGGTCGGTTAACAGAGCTCACTTATG 442
BSNT_01151___ 443 ACGTGCCAAGCAAACTCAAAACAATGCTCGGCCAGCTTGCTTATTATTTA 492
|.|||||.||.||.||.||.||||||||.||.||||||||.|||||||||
BPUM_0650___y 443 AAGTGCCTAGTAAGCTGAAGACAATGCTTGGACAGCTTGCGTATTATTTA 492
BSNT_01151___ 493 AAAGGAATGGAAATGCTGCCTTCACTTCGTCCGACAGAAGTCGAGATTGA 542
|||||.|||||.|||||.|||||..|.||.||||||||||||||.|||||
BPUM_0650___y 493 AAAGGCATGGAGATGCTTCCTTCGATCCGCCCGACAGAAGTCGAAATTGA 542
BSNT_01151___ 543 ATATGACGGCAAGCTGTTTCAAGGTGAAATCATGCTGTTTTTGGTCACGC 592
|||||||||.|||.|||||||.||.|||||||||||||||.|.||..|.|
BPUM_0650___y 543 ATATGACGGTAAGTTGTTTCATGGAGAAATCATGCTGTTTCTTGTTTCAC 592
BSNT_01151___ 593 TGACAAACTCCGTCGGCGGGTTTGAAAAGCTCGCGCCGGATTCC-----A 637
|.||||||||.||.|||||.|||||||||||.|||||.|||||| |
BPUM_0650___y 593 TCACAAACTCAGTAGGCGGCTTTGAAAAGCTAGCGCCAGATTCCGTTTTA 642
BSNT_01151___ 638 GCCTGAATGACGGCATGTTTGATTTGATGATATTAAAGAAAGCAAACCTT 687
| ||||.||.||||||||..||||.||.||||||||.|..|||||.
BPUM_0650___y 643 G-----ATGATGGGATGTTTGACCTGATTATTTTAAAGAAGGTCAACCTA 687
BSNT_01151___ 688 GCTGAATTTATCAGGGTCGCTACGATGGCGCTTCGCGGCGAACATATCAA 737
||.|||...||..|.||.|..|...|.||.|||||.|||||.|||||..|
BPUM_0650___y 688 GCAGAAGCCATTCGAGTAGTCAGCCTTGCACTTCGAGGCGAGCATATTCA 737
BSNT_01151___ 738 CGACCAGCACATTATTTATACAAAAGCGAACCGCGTGAAAGTCAATGTAT 787
.||..|..|..|.||.||..||||||||||||||||.|||||..|||||.
BPUM_0650___y 738 TGATAACAATGTCATCTACGCAAAAGCGAACCGCGTAAAAGTAGATGTAA 787
BSNT_01151___ 788 CAGAAAAGATGCAGCTGAACCTGGACGGCGAGTACGGCGGCATGCTGCCG 837
.|||.||.|||||..||||..|.||.|||||.||.||||||||||||||.
BPUM_0650___y 788 AAGATAAAATGCAATTGAATTTAGATGGCGAATATGGCGGCATGCTGCCA 837
BSNT_01151___ 838 GGCGAATTCGTGAATCTGTATCGACACATTCACGTCGTCATGCCGAAGGA 887
||.|||||.|..||.||||||||.||.||..|..|..|..||||
BPUM_0650___y 838 GGTGAATTTGAAAACCTGTATCGTCATATAGAATTTATTGTGCC------ 881
BSNT_01151___ 888 GAAAGCGGAACAGCTGGATGACTAA----- 912
.||||| ||||||||.|..|.||.
BPUM_0650___y 882 AAAAGC--AACAGCTGAAAAAATAGGGTAG 909
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