Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05747 and BPUM_0663
See
Amino acid alignment /
Visit
BSNT_05747 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:19
# Commandline: needle
# -asequence dna-align/BSNT_05747___ywgB.1.24716.seq
# -bsequence dna-align/BPUM_0663.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05747___ywgB-BPUM_0663.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05747___ywgB-BPUM_0663.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05747___ywgB
# 2: BPUM_0663
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 564
# Identity: 257/564 (45.6%)
# Similarity: 257/564 (45.6%)
# Gaps: 219/564 (38.8%)
# Score: 431.5
#
#
#=======================================
BSNT_05747___ 1 ATGAAA-AT--GAAATCAGGAATGGAGCAGGCGGTTTCTGTGC------- 40
|||||| || .|||.| ||.|| .||.|||
BPUM_0663 1 ATGAAATATTCTAAAGC-------GACCA-------ACTATGCACTTCAT 36
BSNT_05747___ 41 ----TGCTGTTACTGTCAC-GGCTGCC----GGTACAG------------ 69
||.|.||..|..||| .||| || ||.|.||
BPUM_0663 37 ACGATGGTCTTTTTAACACTTGCT-CCAAAGGGGAAAGCAATAGGCGTTG 85
BSNT_05747___ 70 -GCTTCTTTGACG-TCAGAGG------CTATAAGCCAGCGATTGCGCGTG 111
||.||| || |.|||.| ||.|.|||||.|.|||
BPUM_0663 86 AGCCTCT----CGCTAAGATGCAAGACCTTTCAGCCACCTATT------- 124
BSNT_05747___ 112 TCTCC---GTCTTACTTGAAGAAGCTGATGAGAACATTGGTTCAAGCCGG 158
|.||| .|.||| |..|||||..||| |.||.||
BPUM_0663 125 TATCCAAAATTTTA----ACAAAGCTTGTGA------------AGGCAGG 158
BSNT_05747___ 159 TTTGGCAGAATCCTTACCAGGGACGAAGGGCGGTTTTACC---CTGACGA 205
.|||...|||||...|||.||..|.||.||.||||..||| ||||..|
BPUM_0663 159 ATTGATTGAATCAACACCTGGCGCAAAAGGTGGTTACACCATTCTGAAAA 208
BSNT_05747___ 206 AG--------CCTTTGGCTGACATTACGCTTTATGATGTTTATCAAGCGG 247
|| ..||| |||| |||| ||.||...||||||||
BPUM_0663 209 AGAAAGAGGATATTT------CATT----TTTA-GACGTCATTCAAGCGG 247
BSNT_05747___ 248 TCGAAGG-CAGA-------GGTTCGATGTATCAGGGGAA----AGGCTTG 285
|.||||| ||.| ..||||.||| ||....||| |..|||.
BPUM_0663 248 TAGAAGGTCAAACCAATTTATTTCGTTGT-TCCTTAGAACATGATTCTTT 296
BSNT_05747___ 286 C-TGC-----AATCTGTATTTGAGGGTGA--AAGTCACTGTGTGCTGGA- 326
| ||| |||...|.||||| .||| |||.|| |||.|||
BPUM_0663 297 CATGCCTCATAATGGTTGTTTGA--TTGAACAAGCCA-----TGCAGGAT 339
BSNT_05747___ 327 ---GACAGTCATGGCGGAAATCGAGGATAAA--TGGTCCAATCTTATGAG 371
||.| ||.||||..||||.|.| |.|||.|| ||
BPUM_0663 340 GTTGAAA-------CGAAAATGCAGGAAACACTTAGTCAAA-------AG 375
BSNT_05747___ 372 -----AGAAGA-ATC-CTTGC-------AGCATGTTATGGACAGAGTCGG 407
||..|| ||| ||.|| |||| ||||||
BPUM_0663 376 CGGTTAGTCGATATCGCTAGCCAAATTGAGCA-------GACAGA----- 413
BSNT_05747___ 408 GGAATTGTATGATCTTGAAAAAATAGATGATTGGGTAATCAAGCAAGTGA 457
|||||||..|| |..||||| |.||||
BPUM_0663 414 -----------------AAAAAATCCAT-------TTTTCAAG-ATGTGA 438
BSNT_05747___ 458 AAGGGCAATTGTAA 471
BPUM_0663 438 -------------- 438
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.