Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01289 and BPUM_0719

See Amino acid alignment / Visit BSNT_01289 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:52
# Commandline: needle
#    -asequence dna-align/BSNT_01289___yflG.1.24716.seq
#    -bsequence dna-align/BPUM_0719___yflG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01289___yflG-BPUM_0719___yflG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01289___yflG-BPUM_0719___yflG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01289___yflG
# 2: BPUM_0719___yflG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 770
# Identity:     546/770 (70.9%)
# Similarity:   546/770 (70.9%)
# Gaps:          40/770 ( 5.2%)
# Score: 1803.0
# 
#
#=======================================

BSNT_01289___      1 ATGATTGTAACAAAC--GATCAAGAATTAGAAGGCCTGAAAAAAA-TCGG     47
                     .|||||||  |||||  |||||.||.|||||| ||||.||||||| ||||
BPUM_0719___y      1 GTGATTGT--CAAACATGATCATGAGTTAGAA-GCCTTAAAAAAAGTCGG     47

BSNT_01289___     48 AAGAATCGTCGCGCTTGCGCGTGAAGAAATGAAGCGGAAGGCAGAG----     93
                     ..||||.|||||..|.||..|.|||||||||||    |||.|| ||    
BPUM_0719___y     48 CCGAATTGTCGCTTTGGCAAGAGAAGAAATGAA----AAGCCA-AGCGAA     92

BSNT_01289___     94 -CCCGGCATGAGCACAAAAGACCTTGACCTTATCGG--AAAAGCTGTGCT    140
                      ||.||||||...||||||||.||.||..|.||.||  ||||..|.|  |
BPUM_0719___y     93 ACCAGGCATGTCTACAAAAGAACTAGATTTGATTGGGAAAAAAATAT--T    140

BSNT_01289___    141 TGATGAGCACGGCGCCGTTTCAGCTCCTGAGAAGGAATACGATTTTCCAG    190
                     .||.||.||.||.||...||||||.|||||.||||||||.||.||.||.|
BPUM_0719___y    141 AGAAGAACATGGGGCGAATTCAGCACCTGAAAAGGAATATGACTTCCCTG    190

BSNT_01289___    191 GCGTGACATGCATCAGCGTAAATGATGAAGTGGCTCACGGCATACCAAGC    240
                     |...|||.||.||||||||.||.||||||||.||||||||.||.||||| 
BPUM_0719___y    191 GAACGACTTGTATCAGCGTGAACGATGAAGTTGCTCACGGTATTCCAAG-    239

BSNT_01289___    241 ACATCCAAA----ATTTTAAAAGCAGGG-GACCTTGTCAACATCGACATC    285
                        |..|||    ||||||.||| |||| |||||..||||.||.||.||.
BPUM_0719___y    240 ---TGAAAAAACCATTTTACAAG-AGGGCGACCTCATCAATATTGATATT    285

BSNT_01289___    286 TCCGCTGAATTTGGCGGCTTCTATTCCGACACAGGCATCTCATTTGTGCT    335
                     ||.||.||..|.|.|||||..||||||||.||.|||||.||.||.||..|
BPUM_0719___y    286 TCAGCAGAGCTGGACGGCTATTATTCCGATACCGGCATTTCCTTCGTATT    335

BSNT_01289___    336 CGGTGAAGGAGAAGAACGCCTTCATAAGC--TTTGCCAATGCGCGGAAAA    383
                     .|||..|||.||.|..||.|||  .||||  |.|||||.||.||.||..|
BPUM_0719___y    336 AGGTACAGGTGATGCTCGTCTT--GAAGCATTATGCCAGTGTGCAGAGGA    383

BSNT_01289___    384 CGCTTT--TCAAAAGGGGCTT-CAGCAGGCAAAAGCGGGCAAGCGCCAAA    430
                     .||.||  ||.||   ||.|| .||||.||||||||.|||||..|.||||
BPUM_0719___y    384 TGCATTCCTCGAA---GGATTAAAGCATGCAAAAGCCGGCAAAAGACAAA    430

BSNT_01289___    431 ACCAGATCGGAAGAGCCGTTTATCATGAAGCACGCTCTCAAGGCTTTACC    480
                     |.||.||.||..|.||.||.||..||..||||......|||||.|||||.
BPUM_0719___y    431 ATCAAATTGGCCGTGCGGTCTACAATACAGCAAAAGAACAAGGATTTACT    480

BSNT_01289___    481 GTCATCAAAACCCTGACCGGCCACGGAATCGGCCGAAGCCTGCATGAAGC    530
                     |||||.||||.||||||.||.||.||.||.||...|||.||.||||||||
BPUM_0719___y    481 GTCATTAAAAACCTGACAGGACATGGCATTGGGAAAAGTCTCCATGAAGC    530

BSNT_01289___    531 GCCGAATCACATCATGAACTATTATGATCCGTTTGATAACGCACTGTTCA    580
                     .||.||.||.||..||||||||||||||||.||.|||||.||..||||.|
BPUM_0719___y    531 ACCTAACCATATTTTGAACTATTATGATCCATTCGATAATGCTTTGTTTA    580

BSNT_01289___    581 AAAATGGCACAGTCATCGCGCTTGAACCGTTTATTTCAACGAAAGCAGAA    630
                     |.||||||||.||.|||||..|||||||.|||||||||||.||.||.|||
BPUM_0719___y    581 AGAATGGCACCGTGATCGCCTTTGAACCTTTTATTTCAACAAATGCTGAA    630

BSNT_01289___    631 ACGATTGTTGAAGCTGGAGACGGCTGGACGTTCAAGACGCCGGATAAAAG    680
                     .|||||..|.|.||||..||.||||||||.||.||.||.||.||||||||
BPUM_0719___y    631 TCGATTTATCAGGCTGATGATGGCTGGACCTTTAAAACACCAGATAAAAG    680

BSNT_01289___    681 CATGGTTGCCCAAGTTGAACACACGATCGTCATCACAAAAGATGAACCGA    730
                     |.|.||.||.||..|||||||.||.||.||.||.||||||||.|||||.|
BPUM_0719___y    681 CCTAGTCGCACAGATTGAACATACCATTGTGATTACAAAAGACGAACCAA    730

BSNT_01289___    731 TTATCCTGACGAAACTGTAA    750
                     ||||..|.||.||.||||||
BPUM_0719___y    731 TTATATTAACAAAGCTGTAA    750


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