Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01318 and BPUM_0734
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:55
# Commandline: needle
# -asequence dna-align/BSNT_01318___yfkK.1.24716.seq
# -bsequence dna-align/BPUM_0734___yfkK.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01318___yfkK-BPUM_0734___yfkK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01318___yfkK-BPUM_0734___yfkK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01318___yfkK
# 2: BPUM_0734___yfkK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 238
# Identity: 155/238 (65.1%)
# Similarity: 155/238 (65.1%)
# Gaps: 44/238 (18.5%)
# Score: 521.0
#
#
#=======================================
BSNT_01318___ 1 TTGTCCAGCCCAAATA----CAGAAACATTAACTCAAATGATTGAAGAGA 46
|||| |||..||||.| |.|| |.|.|.|||..||||||||||.|
BPUM_0734___y 1 TTGT-CAGAGCAAAAAGCGGCTGA---AGTCAATCAGCTGATTGAAGACA 46
BSNT_01318___ 47 TTTCCCAAAAGCTGAACATGCTGAACGTCGGCGTAATCAAAGCGGAGGAT 96
||||.||||||.|.||.|||||||||.|.||.||.||||||||.|||||.
BPUM_0734___y 47 TTTCGCAAAAGTTAAATATGCTGAACATTGGAGTCATCAAAGCAGAGGAC 96
BSNT_01318___ 97 TTCAGTGATGAGAAG---------ATTGAAGACCTCACGTACCTTCACAG 137
||||||...||.||| |||||| |..||||||..
BPUM_0734___y 97 TTCAGTCCAGACAAGTACGAAGATATTGAA---------TTTCTTCACCA 137
BSNT_01318___ 138 CATGGTGATGAAAAAAGAATCATTCAGCCCAAGTGAAATGCAGGCGAT-- 185
.|||||||||||||||...|||||||||||||||||||||||.||.||
BPUM_0734___y 138 AATGGTGATGAAAAAATCTTCATTCAGCCCAAGTGAAATGCAAGCCATCG 187
BSNT_01318___ 186 ------TGCTCAAGAATTAGCCTCGCTT-CGTAAATAA 216
.|||.||.|| ||| .|.||||||
BPUM_0734___y 188 CAAGCGAGCTAAAAAA---------CTTAAGAAAATAA 216
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