Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01165 and BPUM_0743

See Amino acid alignment / Visit BSNT_01165 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:48
# Commandline: needle
#    -asequence dna-align/BSNT_01165___yeeI.1.24716.seq
#    -bsequence dna-align/BPUM_0743___yeeI.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01165___yeeI-BPUM_0743___yeeI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01165___yeeI-BPUM_0743___yeeI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01165___yeeI
# 2: BPUM_0743___yeeI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 723
# Identity:     557/723 (77.0%)
# Similarity:   557/723 (77.0%)
# Gaps:           6/723 ( 0.8%)
# Score: 2123.0
# 
#
#=======================================

BSNT_01165___      1 ATGGGCCGTAAGTGGAACAATATTAAAGAGAAGAAGGCGTCTAAGGACGC     50
                     |||||.||||||||||||||.||||||||.|||||.||.||.|||||.||
BPUM_0743___y      1 ATGGGTCGTAAGTGGAACAACATTAAAGAAAAGAAAGCATCAAAGGATGC     50

BSNT_01165___     51 AAATACGAGTCGGATTTATGCGAAGTTTGGCCGTGAGATTTATGTGGCGG    100
                     .|.|||.|||||.|||||.||.||.||.||.|||||.||.||||||||.|
BPUM_0743___y     51 CAGTACAAGTCGTATTTACGCAAAATTCGGGCGTGAAATCTATGTGGCTG    100

BSNT_01165___    101 CGAAACAGGGCGAGCCTGATCCGGAATCCAACCAGGCGCTGAAGGTTGTG    150
                     |.|||||.||.|||||..|.||.|||||.|||||.||.||.....||||.
BPUM_0743___y    101 CCAAACAAGGTGAGCCAAACCCAGAATCAAACCAAGCACTTCGTTTTGTC    150

BSNT_01165___    151 CTTGAGCGTGCGAAGACTTACAGCGTGCCGAAAAACATCATTGAACGTGC    200
                     ||.||.|||||.||.||.||.||.||.||.|||.||||..|.||.|||||
BPUM_0743___y    151 CTAGAACGTGCAAAAACATATAGTGTCCCAAAACACATTGTAGACCGTGC    200

BSNT_01165___    201 GATCGAGAAGGCGAAGGGCGGAGCGGAAGAGAATTACGATGAGCTTCGTT    250
                     .||.||.||.||.||.||.||.|||||||||||||.|||||||||.||.|
BPUM_0743___y    201 CATTGAAAAAGCAAAAGGTGGTGCGGAAGAGAATTTCGATGAGCTGCGCT    250

BSNT_01165___    251 ATGAGGGCTTCGGGCCGAACGGATCAATGATTATCGTTGATGCGCTGACG    300
                     |.||.||.||.||.||.||||||||||||.|.|||||||||||.||.||.
BPUM_0743___y    251 ACGAAGGATTTGGTCCAAACGGATCAATGGTCATCGTTGATGCCCTTACC    300

BSNT_01165___    301 AATAATGTAAACCGTACGGCGCCGGAAGTGCGTGCGGCGTTCGGGAAAAA    350
                     |||||.||.||||||||.||..|.||.||.||||||||.|||||||||||
BPUM_0743___y    301 AATAACGTGAACCGTACAGCATCAGATGTTCGTGCGGCATTCGGGAAAAA    350

BSNT_01165___    351 CGGCGGAAACATGGGTGTGAGCGGATCTGTTGCTTACATGTTTGACGCGA    400
                     |||.|||||||||||.||.|||||.||||||||.||||||||||||...|
BPUM_0743___y    351 CGGTGGAAACATGGGCGTAAGCGGCTCTGTTGCCTACATGTTTGACCAAA    400

BSNT_01165___    401 CGGCTGTAATCGGTGTGGAAGGCAAAACGGCTGACGAAGCGCTTGAAATC    450
                     |.|||||.||||||||.|||||.||||..|..||.|||.|||||||..|.
BPUM_0743___y    401 CAGCTGTCATCGGTGTCGAAGGAAAAAGTGAAGAAGAAACGCTTGAGCTT    450

BSNT_01165___    451 CTGATGGAAGCGGATGTTGATGTACGTGACATTTTAGAAGAGGATGACAG    500
                     .|.||||||||.||.|||||||||||||||||..|.|||||.|||||.|.
BPUM_0743___y    451 TTAATGGAAGCAGACGTTGATGTACGTGACATCATGGAAGAAGATGAAAC    500

BSNT_01165___    501 CGTGATCGTATATGCTGAGCCTGATCAATTCCATGCGGTGCAAGAGGCGT    550
                     .|||||.|||||.|||||.||.||||||||||||...||.|||||.||.|
BPUM_0743___y    501 AGTGATTGTATACGCTGAACCAGATCAATTCCATCAAGTACAAGAAGCAT    550

BSNT_01165___    551 TTAAAAACGCGGGCGTTGAGGAATTTACAGTAGCGGAGCTGACAATGCTT    600
                     |.|||.|.||.|||||.||.||||||||.||.||.||..|.|||||||||
BPUM_0743___y    551 TCAAACAAGCCGGCGTAGAAGAATTTACTGTCGCTGAAATCACAATGCTT    600

BSNT_01165___    601 GCGCAAAGTGAAGTAACGCTTCCGGATGATG---CAAAGGAACAGTTTGA    647
                     .|.||||.||||||.||..|   .|||||||   |.||.|||||.||.||
BPUM_0743___y    601 CCTCAAAATGAAGTGACATT---AGATGATGAATCTAAAGAACAATTCGA    647

BSNT_01165___    648 AAAATTGATTGATGCATTAGAAGATTTGGAAGATGTTCAGCAGGTATATC    697
                     .|||.|.||.||||.|||||||||..|.|||||.||.||||||||.||||
BPUM_0743___y    648 GAAACTAATCGATGTATTAGAAGAGCTTGAAGACGTGCAGCAGGTTTATC    697

BSNT_01165___    698 ATAACGTTGATTTAGGTGAGTAA    720
                     ||||.||.||||||||.||.|||
BPUM_0743___y    698 ATAATGTGGATTTAGGGGAATAA    720


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