Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01336 and BPUM_0750
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:56
# Commandline: needle
# -asequence dna-align/BSNT_01336___yfjQ.1.24716.seq
# -bsequence dna-align/BPUM_0750___corA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01336___yfjQ-BPUM_0750___corA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01336___yfjQ-BPUM_0750___corA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01336___yfjQ
# 2: BPUM_0750___corA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1029
# Identity: 666/1029 (64.7%)
# Similarity: 666/1029 (64.7%)
# Gaps: 138/1029 (13.4%)
# Score: 2020.5
#
#
#=======================================
BSNT_01336___ 1 ---ATGATCAACATTACCGCAATCACAACAGAGCATCAGCTGCTGAAAAA 47
.|||..||.||| |||.|.||||.| |.|.||..||
BPUM_0750___c 1 ATGCTGAAGAAAATT---GCAGTGACAAAA----AACGGCGACT------ 37
BSNT_01336___ 48 TATACCGATCGAAC------GAGTGGAACAG---------CCTGATATTG 82
.|||.|||| .|.||.|.||| ||||||||.|
BPUM_0750___c 38 -----TGATTGAACATGCAACATTGCAGCAGCTTTCAAGCCCTGATATCG 82
BSNT_01336___ 83 CATGGTACTGGGTTGATTTTTACG-GCCCGGAGGATACGGAAA------C 125
|.|||||.|||.||||||||.|.| ||| |||||||| |
BPUM_0750___c 83 CCTGGTATTGGATTGATTTTCATGCGCC-------TACGGAAAAGGAAGC 125
BSNT_01336___ 126 GGCGTTATTGAGAGATTTTTTTCATTTTCACCCGCTTGCCATTGAGGATT 175
.||..|.||||..||.|..|||||.||.||.||||||||.||||||||||
BPUM_0750___c 126 AGCACTTTTGAAGGAATACTTTCAGTTCCATCCGCTTGCGATTGAGGATT 175
BSNT_01336___ 176 GCTTCCAGCACATGCAGCGGCCGAAGCTTGACCATTATGACGGCTATCGT 225
|||||||..|..|.|||.||||||||||.||...||||||.||.|||...
BPUM_0750___c 176 GCTTCCATTATTTACAGAGGCCGAAGCTAGATTTTTATGAAGGATATTTA 225
BSNT_01336___ 226 TTTTACGTGATTCATGCGCTGAATAAGGAAACACTT-GAGACGGAGGAAG 274
||||.||||.|||||||.||.|||.|..||||.||| || .|.||||||.
BPUM_0750___c 226 TTTTTCGTGCTTCATGCTCTTAATCAAAAAACGCTTCGA-TCTGAGGAAA 274
BSNT_01336___ 275 TCGATATCTTTCAAGGCGAAAAATTTGTCGTCACCTTTCATTTACACGAA 324
|||||.|.|||...||.||.||.|.|.||||.|||||||||||..|.|||
BPUM_0750___c 275 TCGATCTGTTTGTTGGGGACAATTATATCGTGACCTTTCATTTGAAGGAA 324
BSNT_01336___ 325 ACGCCAGGTATCGCTAAAGTCCGGGAGCGTTTGT-ATGC-----TTCACC 368
.||||| ||.|.| ||.|| ||| ||.| .|||..
BPUM_0750___c 325 GCGCCA--------TACATT----GACCG--TGTCATTCGAAAACTCAAA 360
BSNT_01336___ 369 GGATAT-ATTGAAA-----AAA----GGGCCCGGGCATATTTCTTATATG 408
|.||.| || ||| ||| |||||.|.||||||..|.||.|||
BPUM_0750___c 361 GAATCTGAT--AAAGCCAGAAACAGTGGGCCTGAGCATATCGCCTACATG 408
BSNT_01336___ 409 ATCATGGATCAGCTTGTTGATGAATATTTTCCTCTCGTGTATAAAATCGA 458
.|.||.|||||||||||.|||||.|||||.|||.|..|.|||.||||.||
BPUM_0750___c 409 TTGATTGATCAGCTTGTCGATGATTATTTCCCTATTATTTATCAAATAGA 458
BSNT_01336___ 459 AGACCGGCTGAATGAAAT------TGAAGAAAGCCGTCCCCACAAAACGT 502
.|||.|.||||||||||| ||||||..| .||.|||||.|
BPUM_0750___c 459 GGACAGACTGAATGAAATCGAGGATGAAGAGGG------TCATAAAACAT 502
BSNT_01336___ 503 ATGGAATGCTGATGAACGAGGTGTT--TGATCTCAGAACAGACCTATTGC 550
||||||..|||||||||||.||.|| .||| || ||.|.|| .||||
BPUM_0750___c 503 ATGGAACACTGATGAACGAAGTATTCGGGAT-TC-GATCCGA---TTTGC 547
BSNT_01336___ 551 ATTTAA-----GACGGACGATTATCCCGATGCGTGA--TTTGCTCTACCG 593
|.|| ||.|.|||||||||||.|||.|.|| ||| |.||.||
BPUM_0750___c 548 --TCAAACTGCGAAGAACGATTATCCCAATGAGGGACCTTT--TATATCG 593
BSNT_01336___ 594 GATT-TTAAGCCTTGACCATG-TGA------AAGAGCAGCGGGAGACGAA 635
.||| |.||..| ||..||| ||| |.|.|.|.|||.||
BPUM_0750___c 594 TATTGTCAATAC--GAATATGATGAGAAGTGATGCGAACCGGCAG----- 636
BSNT_01336___ 636 AGCCTATTTCAGCGACATATATGATCATTTGTTAAAGTTGTCTGAAATTG 685
||.||.||.|..||.||.||||||||..||||.||..|..|.||.||||
BPUM_0750___c 637 -GCATACTTTAATGATATTTATGATCACCTGTTGAAACTAACCGAGATTG 685
BSNT_01336___ 686 TGGAATCCAACCGTGACATGACGTCCGACTTGCGTGACAGCTACGTGACG 735
|.||.||.||.|||||.|||||..||||.||.||.||||||||...||||
BPUM_0750___c 686 TCGAGTCAAATCGTGATATGACAGCCGATTTACGAGACAGCTATCAGACG 735
BSNT_01336___ 736 CTAAACTCAAACCGGATGAATGCGATTATGATGACACTGACGATCGTATC 785
||.||.||.|||||.|||||||||||.|||||||||.||||.||.|||||
BPUM_0750___c 736 CTGAATTCTAACCGAATGAATGCGATCATGATGACATTGACCATTGTATC 785
BSNT_01336___ 786 AACCATTTTCATCCCGCTCACCTTTATTACCGGTGTATACGGTATGAACT 835
.||||||||.||.||.||.|||||||||...||.||.|||||.|||||||
BPUM_0750___c 786 GACCATTTTTATTCCACTGACCTTTATTGTTGGAGTGTACGGAATGAACT 835
BSNT_01336___ 836 TCGACTTTATGCCGGAGCTGCATTGGAAATACGGATATTTCGCTGTAC-- 883
|.||....|||||.||..|.||.|||||.||.||.|||||.|..||||
BPUM_0750___c 836 TTGATAACATGCCTGAATTACACTGGAAGTATGGCTATTTTGGCGTACTG 885
BSNT_01336___ 884 --TTGGCCTGATGGCTGCGCTTGTGATTGGAATGCTGATTTGGTTTAGAT 931
|| |.||||.|..|||.||....||.|||||..|.|||||||...
BPUM_0750___c 886 ATTT----TCATGGGTCTGCTCGTCTCGGGCATGCTTTTGTGGTTTAAGC 931
BSNT_01336___ 932 ATAAAGGATGGTTCAATATTTTTAAATGA 960
||||||||||||||...||.||.||||.|
BPUM_0750___c 932 ATAAAGGATGGTTCCGCATATTCAAATAA 960
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