Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01418 and BPUM_0796
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:00
# Commandline: needle
# -asequence dna-align/BSNT_01418___yfhH.1.24716.seq
# -bsequence dna-align/BPUM_0796___yfhH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01418___yfhH-BPUM_0796___yfhH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01418___yfhH-BPUM_0796___yfhH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01418___yfhH
# 2: BPUM_0796___yfhH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 344
# Identity: 214/344 (62.2%)
# Similarity: 214/344 (62.2%)
# Gaps: 58/344 (16.9%)
# Score: 591.5
#
#
#=======================================
BSNT_01418___ 1 ATGGAGAAACGATACAGTCAAATGACACCTCACGAACT----CAATACCG 46
|||||.|||||.||.|||.|.|||||.....|||||.| ||| |
BPUM_0796___y 1 ATGGACAAACGTTATAGTGAGATGACGGAATACGAATTGAAGCAA----G 46
BSNT_01418___ 47 AAATCGCATTACTTTCTGAAAAAGCAAGAAAAGCCGAACAGCATGGAATC 96
|.||.||.|..|||||||||||||||.||||.||.||.||||.|||.||.
BPUM_0796___y 47 AGATTGCCTCTCTTTCTGAAAAAGCACGAAAGGCTGAGCAGCTTGGCATT 96
BSNT_01418___ 97 ATAAACGAACTGGCAGTGCTCGAACGGAAAATTACG--ATGGCAAAAGCA 144
.|.||.|||...||.||..|.||||||||||| || |||||.|||||.
BPUM_0796___y 97 GTGAATGAATATGCCGTCTTAGAACGGAAAAT--CGATATGGCTAAAGCC 144
BSNT_01418___ 145 TA-TTTGCTGAACCCGGAA-----GATTACTCACCGGGAGAAA----CAT 184
|| ||.|..||.|| | |||| |..||| ||| |.|
BPUM_0796___y 145 TACTTAGTAGATCC----AGCCTTGATT-CAAACC-----AAAACGGCCT 184
BSNT_01418___ 185 ATCGTGTGGAAAACACTGAGGACGAGTTTACCATCAGT----TATTTAAA 230
|||...|..||.|.||.||.||.|.|||| |..|| ||||||||
BPUM_0796___y 185 ATCAAATTAAAGATACAGACGAAGCGTTT----TATGTGGAATATTTAAA 230
BSNT_01418___ 231 TGGCGTTTTCGCATGGGGATACAGGACCTCTTCCCCCCAGC--------A 272
|||.||.||.||.||||||||||| .||.| |||| |
BPUM_0796___y 231 TGGTGTATTTGCGTGGGGATACAG--ACTAT------CAGCTCCAAATAA 272
BSNT_01418___ 273 AGAGGAAGCTCTGCCAATCTCAGTATTGCAAGAAAAA-GAATAA 315
|||.||.||.|||||.||.|||.|..|| |.|||||| ||.|.|
BPUM_0796___y 273 AGAAGATGCCCTGCCCATTTCAATGCTG-ACGAAAAAGGACTGA 315
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