Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01430 and BPUM_0800
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:00
# Commandline: needle
# -asequence dna-align/BSNT_01430___csbB.1.24716.seq
# -bsequence dna-align/BPUM_0800___csbB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01430___csbB-BPUM_0800___csbB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01430___csbB-BPUM_0800___csbB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01430___csbB
# 2: BPUM_0800___csbB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1049
# Identity: 697/1049 (66.4%)
# Similarity: 697/1049 (66.4%)
# Gaps: 124/1049 (11.8%)
# Score: 2202.5
#
#
#=======================================
BSNT_01430___ 1 ATGAAGCAAGGATTAATCTCGATTATTATCCCGTCTTACAATGAAGGGTA 50
|||.|.|.||.|||..||||..||||.||.||.||||||||||||||..|
BPUM_0800___c 1 ATGGAACGAGAATTGCTCTCTGTTATAATTCCTTCTTACAATGAAGGTGA 50
BSNT_01430___ 51 TAATGTCAAACTCATTCATGAATCTTTAA--------AAAAGGAATTTAA 92
.||..|||.|| ||||||||.| |..|.||.|||..
BPUM_0800___c 51 AAACATCAGAC--------GAATCTTTGAGGCACTCGAGGAAGAGTTTCG 92
BSNT_01430___ 93 AAACATTCATTATGACTATGAAAT-ATTCTTCATAAACGACGGAAGTGTT 141
..|..||||||||||||.|||||| ||| ||..|.||.||.|||||....
BPUM_0800___c 93 CGATTTTCATTATGACTTTGAAATCATT-TTTGTGAATGATGGAAGCAAA 141
BSNT_01430___ 142 GATGACACGCTTCAGCAGATCAAAGA---CT-TGGCAGCGACGTGCAGCC 187
||..|.||.|||||..|.||.|.||| || |.||| .|.||||| .
BPUM_0800___c 142 GACAATACACTTCAATACATGAGAGAGCTCTCTCGCA--AAAGTGCA--A 187
BSNT_01430___ 188 GGGTAAAATATATATCTTTTTCTCGAAACTTTGGAAAAGAAGCCGCAATT 237
.|||.|||||.||.||.||.||.||.||||||||.||.||||||||.|||
BPUM_0800___c 188 AGGTCAAATACATTTCCTTCTCACGTAACTTTGGGAAGGAAGCCGCTATT 237
BSNT_01430___ 238 TTGGCGGGCTTTGAGCATGTTC--AGGGCGAGGCGGTTATTGTAATGGAT 285
.||||.||..|||| ||.|.| ||||.|.|||.|..||..|.|||||.
BPUM_0800___c 238 CTGGCAGGACTTGA--ATATACGAAGGGAGTGGCTGCGATCATCATGGAC 285
BSNT_01430___ 286 GCCGATCTGCAGCATCCGACATATTTGCTGAAGGAATTTATCAAAGGCTA 335
|||||..|||||||.||.||.||||||.|..|.||.||..|||.|||.||
BPUM_0800___c 286 GCCGACTTGCAGCACCCAACGTATTTGATTCAAGACTTCGTCAGAGGATA 335
BSNT_01430___ 336 CGAAGAAGGGTATGACCAAGTCATTGCCCAAAGGAACAGAAAAGGGGAC- 384
.||||||||.||..||||||||||||||.||.|||||.|.|||||.|||
BPUM_0800___c 336 TGAAGAAGGCTACCACCAAGTCATTGCCAAACGGAACCGTAAAGGAGACA 385
BSNT_01430___ 385 ---AGCTTTGTCCGCTCACTCTTATCATCTATGTACTACAAGTTCATTAA 431
||||| |||||...|||||||||.||||||||.||..|.||.||
BPUM_0800___c 386 GCAAGCTT----CGCTCTTACTTATCATCCATGTACTATAAAGTGATGAA 431
BSNT_01430___ 432 TAAAGCGGTGGAAGTCGATTTGCGTGACGGTGTCGGTGACTTCAG----A 477
.||.|..||.|||||.||.||||||||.||||||||.||.|||.| |
BPUM_0800___c 432 CAAGGTAGTCGAAGTGGACTTGCGTGATGGTGTCGGAGATTTCCGTTTAA 481
BSNT_01430___ 478 TTGTTAAGCCGCCAAGCTGTGAATGCACTTTTGAAGCTGAGCGAAGGAAA 527
||..| ||||||||..|..|||||.|..|..||||.|..||||||||
BPUM_0800___c 482 TTTCT----CGCCAAGCAATCGATGCATTGCTTCAGCTAAAAGAAGGAAA 527
BSNT_01430___ 528 CCGCTTCTCAAAAGGCCTTTTTTGCTGGATTGGCTTTGATCAGAAAA--T 575
.||.||.||||||||.|||||||||||||||||.||||| |||||| |
BPUM_0800___c 528 TCGTTTTTCAAAAGGGCTTTTTTGCTGGATTGGGTTTGA--AGAAAAAGT 575
BSNT_01430___ 576 TGTATTTTATGAAAATGTCGAACGAAAAAACGG-----CACCTCCAAATG 620
..|.|.||||||||||||.|||.||.|..|.|| || |||||
BPUM_0800___c 576 GATCTATTATGAAAATGTAGAAAGACAGCATGGTGATACA-----AAATG 620
BSNT_01430___ 621 GTC-GTTCAGCAGTCTGTTTAATTACGGCATGGACGGCGTCGTTTCATTT 669
||| .|..||.||| |||||||.||||||||.||.||||||.||||.|||
BPUM_0800___c 621 GTCACTAAAGAAGT-TGTTTAACTACGGCATAGATGGCGTCATTTCTTTT 669
BSNT_01430___ 670 AATCATAAG-CCGCTGAG-ATTATGTTTTTATACAGGCATTTTCATCCTG 717
|| ||...| ||||||.| ||| |||||||||||.|||||..|.|||.|.
BPUM_0800___c 670 AA-CAACCGCCCGCTGCGTATT-TGTTTTTATACTGGCATACTGATCTTA 717
BSNT_01430___ 718 CTGCTTTCCATCATTTATATCATTGCCACATTCGTTAAAAT--TCTGACT 765
.|.|||||..|.|||||.|||.|.|||||.||..||.|||| ||.|
BPUM_0800___c 718 TTCCTTTCTTTGATTTACATCGTGGCCACCTTTATTCAAATCGTCAG--- 764
BSNT_01430___ 766 AACGGTATTTCT-GTGCCTGGGTATTTCACCATTATCTCAGCAGTGTTAT 814
|||||...|..| ||.|||||.||||||||..|.||.||.||.|||.|.|
BPUM_0800___c 765 AACGGGCGTGATGGTACCTGGTTATTTCACTTTAATATCGGCTGTGCTTT 814
BSNT_01430___ 815 TTCTCGGCGGAGTACAGCTGTTAAGCCTTGGAATTATAGGTGAATATATC 864
|.|||||.||.||.|||||.||.||.||.||..|.||.||.||||||||.
BPUM_0800___c 815 TCCTCGGAGGTGTCCAGCTTTTGAGTCTAGGTGTGATTGGAGAATATATT 864
BSNT_01430___ 865 GGCCGAATCTATTATGAAACAAAAAAACGCCCGCATTATTTGATCAAAGA 914
|||||.||.|||||||||||.|||||..|.|||||||||||||||.||||
BPUM_0800___c 865 GGCCGCATTTATTATGAAACGAAAAAGAGGCCGCATTATTTGATCCAAGA 914
BSNT_01430___ 915 AGCGAATATCCCG-AACAA-AGACCTGC-CT---GAA-ACGAACGA---- 953
|.|.|||.||..| |.||| ||||..|| || ||| |.||.|||
BPUM_0800___c 915 ATCAAATGTCATGCAGCAAGAGACAAGCTCTAAGGAACAAGACCGAGTGT 964
BSNT_01430___ 954 ----------ATT--AAAAAGCATGCGGCGTCTGACAAAAATGCACTGA 990
||| ||.||
BPUM_0800___c 965 TAACACAGTTATTTAAATAA----------------------------- 984
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