Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01435 and BPUM_0811
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:01
# Commandline: needle
# -asequence dna-align/BSNT_01435___yfhS.1.24716.seq
# -bsequence dna-align/BPUM_0811___yfhS.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01435___yfhS-BPUM_0811___yfhS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01435___yfhS-BPUM_0811___yfhS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01435___yfhS
# 2: BPUM_0811___yfhS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 240
# Identity: 161/240 (67.1%)
# Similarity: 161/240 (67.1%)
# Gaps: 30/240 (12.5%)
# Score: 551.5
#
#
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BSNT_01435___ 1 ATGTATGTCGGACGTGATATGAGCGA-ATTGAACATGGTTTCCAAAAAAG 49
||||||||||||||.|||.|.|||.| .||| .||||.|.|||||..|..
BPUM_0811___y 1 ATGTATGTCGGACGCGATTTAAGCCAGCTTG-GCATGATGTCCAAGGATC 49
BSNT_01435___ 50 ATTGGAAGAACAGTGAACTCGCTTATTTTCATCATGCCTTTCAGCAAATT 99
|.|||||..|.|.|||.||.|||||.|||||||||||.||.||.||||||
BPUM_0811___y 50 AATGGAAAGATACTGAGCTTGCTTACTTTCATCATGCTTTCCAACAAATT 99
BSNT_01435___ 100 ATGCCTTATTTGAACGAAGAAGGCCAATCAAAATACCGGGAATTAACGCA 149
.|.||||||||.|||||||||||.|||||.||.||.||.|||.| ||
BPUM_0811___y 100 TTACCTTATTTAAACGAAGAAGGGCAATCTAAGTATCGAGAAAT----CA 145
BSNT_01435___ 150 ----AGAAATTGAAGCGCGCGGCGGAATGAAGCGCAATGAAGCGGACTAC 195
.|||||.||||..|||||.||..||.|.||.||||||||.||.||.
BPUM_0811___y 146 TTTCTGAAATCGAAGACCGCGGGGGTCTGCACCGAAATGAAGCCGATTAT 195
BSNT_01435___ 196 AGCCACGGCACGCGCGTCTCTTACGATTAA---------- 225
|.||||||.|| .|||.||||
BPUM_0811___y 196 ACCCACGGTAC----------AACGGTTAAATACGACTAG 225
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