Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01441 and BPUM_0817
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:01
# Commandline: needle
# -asequence dna-align/BSNT_01441___ygaC.1.24716.seq
# -bsequence dna-align/BPUM_0817.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01441___ygaC-BPUM_0817.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01441___ygaC-BPUM_0817.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01441___ygaC
# 2: BPUM_0817
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 534
# Identity: 426/534 (79.8%)
# Similarity: 426/534 (79.8%)
# Gaps: 6/534 ( 1.1%)
# Score: 1700.0
#
#
#=======================================
BSNT_01441___ 1 ATGGGCTATCCCAAGGAAGGAGAAACCATTCAAATTCACAGCTATAAGCA 50
|||||||||||||||||||||||||||||.||||||||.||||||||.||
BPUM_0817 1 ATGGGCTATCCCAAGGAAGGAGAAACCATCCAAATTCAAAGCTATAAACA 50
BSNT_01441___ 51 CAACGGGCTGATTCATAGAATTTGGAATGAGACAACAATCTTAAAAAGTA 100
|||.||..||||.||.||.|||||||||||.||.||.||..|.|||...|
BPUM_0817 51 CAATGGCTTGATCCACAGGATTTGGAATGAAACCACCATTCTGAAAGCAA 100
BSNT_01441___ 101 CAGAAATGTGTGTCATCGGAGCCAATGACCGGACGATGGTAACCGAATCA 150
|.|||.|||||.||||.||.||.||.||||||||.|||||.||.|||||.
BPUM_0817 101 CGGAATTGTGTATCATTGGTGCAAACGACCGGACAATGGTGACTGAATCC 150
BSNT_01441___ 151 GACGGCCGGACATGGATAACCAGAGAGCCCGCAATCTGTTATTTTCACGC 200
||||||||.||.|||||.||.|||||.||.||.||.||.|||||.||.||
BPUM_0817 151 GACGGCCGTACTTGGATGACGAGAGAACCGGCTATTTGCTATTTCCATGC 200
BSNT_01441___ 201 AAGACAATGGTTTAATGTCATCGGGATGCTGAGGGAAGACGGGGTTCATT 250
||.|||||||||||||||.||.||||||||.||.||.||.|||||..|||
BPUM_0817 201 AAAACAATGGTTTAATGTGATTGGGATGCTTAGAGATGATGGGGTATATT 250
BSNT_01441___ 251 ATTATTGCAACATCAGTTCTCCGTTTGCCTATGATGGCGAAGCAATTAAA 300
||||.|||||||||||.|||||.|||||....||||..|||||.|||||.
BPUM_0817 251 ATTACTGCAACATCAGCTCTCCTTTTGCAACAGATGAAGAAGCCATTAAG 300
BSNT_01441___ 301 TATATTGATTATGACTTAGATGTTAAGGTTTTTCCTGACATGACCTACAA 350
|||||||||||.||.||||||||.||.||.|||||.||||||||.|||||
BPUM_0817 301 TATATTGATTACGATTTAGATGTCAAAGTCTTTCCGGACATGACGTACAA 350
BSNT_01441___ 351 TATTCTCGATGAAGACGAATATGATGATCAT---CGGAAAGCCATGAATT 397
||||.|.|||||.||.|||||||..|||||| .||.|| |||||||
BPUM_0817 351 TATTTTGGATGAGGATGAATATGCAGATCATAAGAGGCAA---ATGAATT 397
BSNT_01441___ 398 ATCCAAAAGAAATCGACAGTATTTTAAGAGACTACTTAAATACGCTGCTC 447
|||||||.||||||||.|||||.||||||||..|..|.|||||..|..|.
BPUM_0817 398 ATCCAAAGGAAATCGATAGTATCTTAAGAGAGCATCTGAATACATTATTG 447
BSNT_01441___ 448 CATTGGATTCACCAGCGTCAGGGACCGTTTGCGCCCGAGTTTGTCGATAT 497
||.||||||||||||||..|.||.||||||||.||.||.|||||.|||||
BPUM_0817 448 CACTGGATTCACCAGCGGAAAGGTCCGTTTGCTCCTGAATTTGTGGATAT 497
BSNT_01441___ 498 GTGGTATGAACGGTATTTGCGCTATACAAAATAA 531
||||||||||||.|.|||.|..||||||||||||
BPUM_0817 498 GTGGTATGAACGTTTTTTACATTATACAAAATAA 531
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