Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01539 and BPUM_0862
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:04
# Commandline: needle
# -asequence dna-align/BSNT_01539___cspB.1.24716.seq
# -bsequence dna-align/BPUM_0862___cspB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01539___cspB-BPUM_0862___cspB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01539___cspB-BPUM_0862___cspB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01539___cspB
# 2: BPUM_0862___cspB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity: 192/243 (79.0%)
# Similarity: 192/243 (79.0%)
# Gaps: 42/243 (17.3%)
# Score: 913.0
#
#
#=======================================
BSNT_01539___ 1 ---------------------------------------ATGTTAGAAGG 11
|||||||||||
BPUM_0862___c 1 GTGAATTTAAGCGTTAAGATCGCTTTAGGAGGAAATTTCATGTTAGAAGG 50
BSNT_01539___ 12 TAAAGTAAAATGGTTCAACTCTGAAAAAGGTTTCGGATTCATCGAAGTAG 61
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0862___c 51 TAAAGTAAAATGGTTCAACTCTGAAAAAGGTTTCGGATTCATCGAAGTAG 100
BSNT_01539___ 62 AAGGTCAAGACGATGTATTCGTTCATTTCTCTGCTATTCAAGGCGAAGGC 111
|||||||||||||||||||||||||.|||||||||||.||||||||||||
BPUM_0862___c 101 AAGGTCAAGACGATGTATTCGTTCACTTCTCTGCTATCCAAGGCGAAGGC 150
BSNT_01539___ 112 TTCAAAACTTTAGAAGAAGGCCAAGCTGTTTCTTTTGAAATCGTTGAAGG 161
||||||||||||||||||||.|||||.||||||||.||||||||||||||
BPUM_0862___c 151 TTCAAAACTTTAGAAGAAGGTCAAGCAGTTTCTTTCGAAATCGTTGAAGG 200
BSNT_01539___ 162 AAACCGCGGACCACAAGCTGCTAACGTTACTAAAGAAGCGTAA 204
.|||||.|||||||||||||||||||| |||..||||||||
BPUM_0862___c 201 TAACCGTGGACCACAAGCTGCTAACGT---TAACAAAGCGTAA 240
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