Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01598 and BPUM_0881

See Amino acid alignment / Visit BSNT_01598 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:06
# Commandline: needle
#    -asequence dna-align/BSNT_01598___glpP.1.24716.seq
#    -bsequence dna-align/BPUM_0881___glpP.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01598___glpP-BPUM_0881___glpP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01598___glpP-BPUM_0881___glpP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01598___glpP
# 2: BPUM_0881___glpP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 599
# Identity:     411/599 (68.6%)
# Similarity:   411/599 (68.6%)
# Gaps:          64/599 (10.7%)
# Score: 1424.5
# 
#
#=======================================

BSNT_01598___      1 ATGAGTTTTCACAACCAGCCGATCTTACCGGCTATTCGCAATATGAAGCA     50
                     |||||||||||..|.||.||.||.|||||.|||.||||||||||||||||
BPUM_0881___g      1 ATGAGTTTTCATGATCAACCCATTTTACCTGCTGTTCGCAATATGAAGCA     50

BSNT_01598___     51 ATTTGATGAGTTTTTAAACAGTTCGTTCTCTTACGGTGTTATTCTTGATA    100
                     ||||||.||.||||||||.|||.|.||..|.||.||||||.|.||||||.
BPUM_0881___g     51 ATTTGAGGAATTTTTAAAAAGTCCATTTACATATGGTGTTTTACTTGATG    100

BSNT_01598___    101 TTCATCTCGGCCAGCTGAAGGGCGTGATCAAAGAAGCGCAAA-----AGC    145
                     ||||..|.||||.||||||||||.|.||.||.||  .|||||     |.|
BPUM_0881___g    101 TTCACTTAGGCCGGCTGAAGGGCATCATGAATGA--GGCAAATGCTCATC    148

BSNT_01598___    146 ACGGAAAGAACATGATGGTGCACGTCGATCTCATTCAAGGGATTAAGCAT    195
                     ||   ||.||.|||.|.||.||.||||||||||||||.||||||||.|||
BPUM_0881___g    149 AC---AAAAAAATGTTTGTCCATGTCGATCTCATTCACGGGATTAAACAT    195

BSNT_01598___    196 GACGAATACGGTGCGGAATTTATATGTCAGGATATCAAGCCCGCTGGGAT    245
                     ||.||.||.||..|.||||||||.||||||||.||.|||||.||.||.||
BPUM_0881___g    196 GATGAGTATGGGACCGAATTTATTTGTCAGGAAATGAAGCCAGCAGGAAT    245

BSNT_01598___    246 TATTTCCACAAGATCGAACGTGATTGCCAAAGCGAAGCAGAAGAAAATTT    295
                     ||||||.||.||.||....||.||.|..|||||.|||||.||.||..|.|
BPUM_0881___g    246 TATTTCTACTAGGTCTTCTGTCATAGTAAAAGCCAAGCAAAAAAAGGTAT    295

BSNT_01598___    296 ATGCCATTCAGCGCCTGTTTTTGCTTGATACAAGCGCGATGGAGAAAAGC    345
                     |.|||||||||||..|||||||.||||||||.|||||.|||||.||||||
BPUM_0881___g    296 ACGCCATTCAGCGAATGTTTTTACTTGATACGAGCGCCATGGAAAAAAGC    345

BSNT_01598___    346 ATGGAGTTTATCGGCAAGCATAAGCCTGACTTCATCGAAGTGCTTCCCGG    395
                     ||||||||..|.||.||.|||...||.||.||.||.|||||..|.||.||
BPUM_0881___g    346 ATGGAGTTCGTTGGGAAACATCGTCCGGATTTTATTGAAGTATTACCGGG    395

BSNT_01598___    396 CATCGTTCCGTCACTCATTCAGGAAATAAAA--------------GAGAA    431
                     |.||||.||              ||||..||              |||..
BPUM_0881___g    396 CGTCGTGCC--------------AAATTTAATTACAGAAGTGCGTGAGCG    431

BSNT_01598___    432 AACAGGGATTCCCATCTTTGCCGGGGGTTTCATCCGTACGGAAGAGGATG    481
                     |.|.|||||.||.||.|||||.||.||.||.||||||||..||||.||||
BPUM_0881___g    432 AGCTGGGATCCCGATTTTTGCAGGCGGATTTATCCGTACAAAAGAAGATG    481

BSNT_01598___    482 T----AGAGCAGGCATTGAAAGCGGGGGCTGTAGCTGTCACAACATCTAA    527
                     |    |||||  || ||| ||||.||.|||..||||||.||.||.||.||
BPUM_0881___g    482 TAGAAAGAGC--GC-TTG-AAGCAGGCGCTACAGCTGTGACGACCTCAAA    527

BSNT_01598___    528 TACCAAATTGTGGAAAAAATATGAAAACTTTTTGACAGAAAGTGATTGA    576
                     |||||...|.||          ||||.|.||    |..|||||||    
BPUM_0881___g    528 TACCACCCTTTG----------GAAAGCGTT----CCAAAAGTGA----    558


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