Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01668 and BPUM_0921

See Amino acid alignment / Visit BSNT_01668 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:10
# Commandline: needle
#    -asequence dna-align/BSNT_01668___sspB.1.24716.seq
#    -bsequence dna-align/BPUM_0921___sspB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01668___sspB-BPUM_0921___sspB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01668___sspB-BPUM_0921___sspB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01668___sspB
# 2: BPUM_0921___sspB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 211
# Identity:     165/211 (78.2%)
# Similarity:   165/211 (78.2%)
# Gaps:          14/211 ( 6.6%)
# Score: 652.0
# 
#
#=======================================

BSNT_01668___      1 ATGGCTAA--CCAAAACTCTTCAAATGACTTGCTAGTTCCTGGCGCAGCT     48
                     ||||||||  |.||.|  .|||||||.|.||.|||||||||||.||||..
BPUM_0921___s      1 ATGGCTAATTCTAATA--GTTCAAATCAATTACTAGTTCCTGGAGCAGAG     48

BSNT_01668___     49 CAGGCTATCGATCAAATGAAACTTGAAATCGCTTCTGAATTCGGCGTTAA     98
                     ||.||.|||||||||||||||...|||||||||||||||||.||||||||
BPUM_0921___s     49 CAAGCAATCGATCAAATGAAATACGAAATCGCTTCTGAATTTGGCGTTAA     98

BSNT_01668___     99 CCTTGGAGCGGACACAACTTCTCGCGCTAACGGTTCTGTCGGAGGAGAAA    148
                     |||||||||.||.||.||..||||||||||||||||.||.||.|||||||
BPUM_0921___s     99 CCTTGGAGCAGAAACTACAGCTCGCGCTAACGGTTCAGTTGGTGGAGAAA    148

BSNT_01668___    149 TCACAAAACGTTTAGTATCTTTCGCTCAGCAGCAAATGGGCGGCAGAGTT    198
                     |||||||||||.|.||.||||.||||||.||.||.|||||.||.|     
BPUM_0921___s    149 TCACAAAACGTCTTGTGTCTTACGCTCAACAACACATGGGTGGAA-----    193

BSNT_01668___    199 CAA-----TAA    204
                     |||     |||
BPUM_0921___s    194 CAAAAGCTTAA    204


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