Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01713 and BPUM_0951
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:13
# Commandline: needle
# -asequence dna-align/BSNT_01713___ecsA.1.24716.seq
# -bsequence dna-align/BPUM_0951___ecsA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01713___ecsA-BPUM_0951___ecsA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01713___ecsA-BPUM_0951___ecsA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01713___ecsA
# 2: BPUM_0951___ecsA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 755
# Identity: 555/755 (73.5%)
# Similarity: 555/755 (73.5%)
# Gaps: 25/755 ( 3.3%)
# Score: 1958.0
#
#
#=======================================
BSNT_01713___ 1 ATGTCTCTGCTATCGGTAAAAGACTTGACCGGCGGATATACAAGGAATCC 50
|||||.||.||..|.||||||||..|.||.||.||||||||.|.||||||
BPUM_0951___e 1 ATGTCCCTTCTCACTGTAAAAGATGTAACGGGTGGATATACGAAGAATCC 50
BSNT_01713___ 51 GGTTTTAAAAAACGTATCATTCACCCTT-------GAACCGAATCAAATT 93
.|||.||||||| |||| ||| || |||...|||||||||
BPUM_0951___e 51 CGTTCTAAAAAA--TATC--TCA---TTTGAATTAGAAAGAAATCAAATT 93
BSNT_01713___ 94 GTCGGATTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACA 143
||.||..|.|||||..|.||.||.||.||.|||||.|||||.||..|.||
BPUM_0951___e 94 GTTGGTCTCATCGGCTTAAACGGGGCGGGGAAAAGCACAACCATTCGCCA 143
BSNT_01713___ 144 CATCATCGGGCTGATGGACCCGCATAAAGGTTCAATCGAATTAAACGGTA 193
.||||||||.||.|||.|.||||||||||||...||.|||||||||||..
BPUM_0951___e 144 TATCATCGGACTCATGAAACCGCATAAAGGTGTGATTGAATTAAACGGGC 193
BSNT_01713___ 194 AAACGTTTGCTGAGGATCCGGAAGGC-TACCGTTCACAATTTACCTATAT 242
.|||..||...||.||||..| |||| ||.|||||.||||||||.|.|||
BPUM_0951___e 194 GAACCCTTCAAGATGATCAAG-AGGCGTATCGTTCGCAATTTACGTTTAT 242
BSNT_01713___ 243 ACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTG 292
.||.|||||||||||.|||||.||||||||.||..|.|..||||||.|.|
BPUM_0951___e 243 TCCAGAAACACCTGTATTATATGAAGAATTAACTTTAAAAGAGCATTTAG 292
BSNT_01713___ 293 AACTAACAGCCATGGCATATGGACTGTCAAAAGAAACGATGGAGA--AAA 340
|.||.|||||.|||||.||.|||||||| .|||.|||.|| .||| ||.
BPUM_0951___e 293 AGCTGACAGCGATGGCTTACGGACTGTC-TAAGGAACAAT-TAGATGAAC 340
BSNT_01713___ 341 GGCTGCCTCCGCTACTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGG 390
|.|||||..|..|.||.||.|||||.||||||||.||..|..||||||||
BPUM_0951___e 341 GCCTGCCGTCATTGCTGAAAGAATTTCGAATGGAGAAACGTTTGAAGTGG 390
BSNT_01713___ 391 TTCCCGGCCCATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTG 440
|||||.||.||||||||.|||||.||||||||||||||.|||||||||||
BPUM_0951___e 391 TTCCCTGCTCATTTTTCAAAAGGTATGAAGCAGAAGGTCATGATTATGTG 440
BSNT_01713___ 441 CGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAGCCTTTTCTAG 490
.||||||.|.|..||.||.|..||.||.||.||||||||.||.||..|||
BPUM_0951___e 441 TGCATTTCTTGTTGAACCAGAACTGTATATCATTGATGAACCGTTCTTAG 490
BSNT_01713___ 491 GGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAACGGATGAATGAAGCG 540
|.||.|||||.|||||.|||||.||.|||||||||||||||||||..|||
BPUM_0951___e 491 GACTCGATCCTCTTGCGATTAATGCACTGCTTGAACGGATGAATGCCGCG 540
BSNT_01713___ 541 AAAAAAGGCGGGGCGAGCGTGCTGATGTCAACACACATTTTGGCAACGGC 590
||.|||..|||.||.||.||.||||||||.||.||.||.|||||.||.||
BPUM_0951___e 541 AAGAAAAACGGCGCTAGTGTCCTGATGTCGACGCATATCTTGGCGACAGC 590
BSNT_01713___ 591 AGAACGCTATTGTGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG 640
||||||||||||||||||.|||||||||||.||..|.||.||..|..|.|
BPUM_0951___e 591 AGAACGCTATTGTGATTCTTTTATTATTTTGCACGAAGGGGAAATCAGAG 640
BSNT_01713___ 641 CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCG 690
||...||.||.|||.|.|||||.|||||.|||||....||||..||.|||
BPUM_0951___e 641 CGAAAGGAACCCTGACGGAGCTGAGAGAACAGTTCAATATGAGAGATGCG 690
BSNT_01713___ 691 GCGCTGGACGATTTGTATCTTGAGCTTACAAAGGAAG-ACGCTGGCCATG 739
.|.||.||.|||.|.|||.|.||..|.|||||||||| |.||| |||
BPUM_0951___e 691 ACACTCGATGATCTTTATTTGGAATTAACAAAGGAAGAAAGCT----ATG 736
BSNT_01713___ 740 AATAA 744
|.|||
BPUM_0951___e 737 AGTAA 741
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