Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01714 and BPUM_0952

See Amino acid alignment / Visit BSNT_01714 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:13
# Commandline: needle
#    -asequence dna-align/BSNT_01714___ecsB.1.24716.seq
#    -bsequence dna-align/BPUM_0952___ecsB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01714___ecsB-BPUM_0952___ecsB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01714___ecsB-BPUM_0952___ecsB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01714___ecsB
# 2: BPUM_0952___ecsB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1365
# Identity:     827/1365 (60.6%)
# Similarity:   827/1365 (60.6%)
# Gaps:         282/1365 (20.7%)
# Score: 2135.5
# 
#
#=======================================

BSNT_01714___      1 ATGAATAA--------TATGCTTGATATTTGGCAGTCGCGGCTGCAGGAG     42
                     ||||.|||        .|.||     ||||||.|.||.||..|..||||.
BPUM_0952___e      1 ATGAGTAAAACGACGCAAAGC-----ATTTGGAAATCACGATTAGAGGAA     45

BSNT_01714___     43 CATATCAAAGAAACAAGAACATACATGAAATATATGCTCAACGATCACCT     92
                     ||.||..||||.|||||||.|||..|.|||||.|||.||||.|||||.||
BPUM_0952___e     46 CACATACAAGATACAAGAAAATATTTAAAATACATGTTCAATGATCATCT     95

BSNT_01714___     93 CGTCATTGTTTTGATTTTTTTTCTAGCGGGCGCTGCAAGCTGGTACAGCA    142
                     .||||||||..|.||||||||.||.||.||||..||.||||||||.||.|
BPUM_0952___e     96 TGTCATTGTGCTCATTTTTTTCCTTGCAGGCGGAGCGAGCTGGTATAGTA    145

BSNT_01714___    143 AATGG---ATACGGGACATTCCCGCTCACTTTCCGTCCTTTTGGGTGATG    189
                     |.|||   |.||   |.|||||.|||||.|||||.||||..|||||.|||
BPUM_0952___e    146 ACTGGCTCAAAC---AAATTCCAGCTCATTTTCCATCCTACTGGGTCATG    192

BSNT_01714___    190 GCCGTGCTGTTTTCGC--TCGTGTTGACAAGCTCTTATGTGCGAACGCTT    237
                     ||.||  |||||||.|  |.||..|||||||||||||.|||||.|||.|.
BPUM_0952___e    193 GCAGT--TGTTTTCTCATTGGTACTGACAAGCTCTTACGTGCGGACGTTG    240

BSNT_01714___    238 TTGAAGGAGGCTGACCT--TGTTTT--CTTATTGCCTCTTGAAGCAAAAA    283
                     .|.||.||.||.||.||  ||||||  |||    |||.|.||||..|..|
BPUM_0952___e    241 ATCAAAGAAGCAGATCTCGTGTTTTTGCTT----CCTTTGGAAGGGAGGA    286

BSNT_01714___    284 TGGAGCCTTACTTGAAGCAGGCGTTTGTCTACAGCTATGTGTCTCAGCTG    333
                     ||||||||||.||.||.||.||.|||..||..||||...|.|||||||||
BPUM_0952___e    287 TGGAGCCTTATTTAAAACAAGCCTTTAACTTTAGCTTCATTTCTCAGCTG    336

BSNT_01714___    334 TTTCCGCTTATTGCGCTG-AGC-ATCGTTGCGATGCCGCTTTATTTCGCA    381
                     |||||.||.|||  |||| |.| ||.||.||..|.||||||||||..|||
BPUM_0952___e    337 TTTCCTCTCATT--GCTGTATCTATTGTCGCACTCCCGCTTTATTCGGCA    384

BSNT_01714___    382 G-----TCACACCGGGGGCTTC--GCTCGTAT---CGTATGCCGCGGTCT    421
                     |     |||.||    |||.||  |.| ||||   |.|||         .
BPUM_0952___e    385 GTGTCTTCAGAC----GGCATCAAGAT-GTATGTGCTTAT---------A    420

BSNT_01714___    422 TTGTC-CAACTGTTGCTGCTGAAGGCGTGGAAT-CAG-GTAATGGAATGG    468
                     |||.| |||.||.|..||.|.||||....|||| ||| |  ||..|||||
BPUM_0952___e    421 TTGGCGCAAATGATTTTGATCAAGGGACTGAATACAGCG--ATTCAATGG    468

BSNT_01714___    469 CGCATGAC----TTTC---CAAAACGACCGCAGCATGAAACGGATGGACG    511
                     .|.|||||    ||||   .|||||.|       ||||.|.||.|.||.|
BPUM_0952___e    469 AGAATGACGTATTTTCAAGGAAAACAA-------ATGAGATGGCTTGATG    511

BSNT_01714___    512 TCA-TCATTCGCTTTGCGGC----GAATACACTCGTTCTTTATTTT----    552
                      || ||.||||.|||    |    |||||          |.|||||    
BPUM_0952___e    512 -CAGTCCTTCGTTTT----CTATTGAATA----------TGATTTTAATC    546

BSNT_01714___    553 ------GTTTTCCA---ATCTGTTTATATGTATGCGCTTCTCG---TCTA    590
                           |||||.||   |||     .||||.|..||| ..|||   |.||
BPUM_0952___e    547 TATACCGTTTTACAGGCATC-----CTATGCAATCGC-AATCGTTTTTTA    590

BSNT_01714___    591 TGTCAT-TATGGCTGTTCTTTATC-TGTATATGTCTT--CC---GCAG-C    632
                     |.|||| |||||    |.|.|||| |||.||   |||  ||   |||| |
BPUM_0952___e    591 TCTCATCTATGG----TGTCTATCTTGTTTA---CTTAACCAATGCAGTC    633

BSNT_01714___    633 AAAACGGAAAACA----TTTAAATGGGAGAGCCATATTGAGTC---CGAA    675
                     ||     |||.||    |||.|||||||....||||||   ||   ||||
BPUM_0952___e    634 AA-----AAAGCAGCCTTTTCAATGGGAATTGCATATT---TCTGACGAA    675

BSNT_01714___    676 TTGAGACGAAAGCAGCGTTTCTATCGGATTGCCAACCTGTTTACTGATGT    725
                     ||.|.||||||.||||||||.|||||..|.|||||..|.|||||.|||||
BPUM_0952___e    676 TTAAAACGAAAACAGCGTTTTTATCGTTTGGCCAATTTATTTACAGATGT    725

BSNT_01714___    726 GCCGCATTTG-CGAAAGCAAGCCAAACGCAGAGCTTATCTCGACT---TT    771
                     |||.|||||| .|||| ||.|..|||.|.|||...|||.|.||||   ||
BPUM_0952___e    726 GCCTCATTTGAAGAAA-CAGGTGAAAAGAAGAATCTATATGGACTGGCTT    774

BSNT_01714___    772 TTGCTGCGGCTTGTGCCGTTTGAACAGCGCAAAACATTTGCCTATATGT-    820
                     |   |||.|.||||.||||.|||.|||||.|||||.|||.|.||.|||| 
BPUM_0952___e    775 T---TGCAGTTTGTTCCGTATGACCAGCGTAAAACTTTTTCTTACATGTA    821

BSNT_01714___    821 --TCACCCGCGCCTTTTTGCGTTCGAGCGATTATTTGGGCATTCTTGTCA    868
                       |.|   |.||.|||||.||.||.|..||.|||||.||   ||||||  
BPUM_0952___e    822 TGTGA---GGGCATTTTTACGGTCAAATGACTATTTTGG---TCTTGT--    863

BSNT_01714___    869 GATTA-----ACGATCGTTTTCGCGCTGATCATTATGTATGTCTCAG--C    911
                     |||||     ||...|||.||.|.|||.||.|||.|||||   .|||  .
BPUM_0952___e    864 GATTAGGCTTACTGCCGTGTTTGTGCTAATTATTTTGTAT---ACAGGTG    910

BSNT_01714___    912 CAGCCCGCTGATT------GCAGCGGTTTTGACTGTGTTTGCCATTTTCA    955
                     ||||..||||..|      ||.||    |||.|| ||||..||.|.||.|
BPUM_0952___e    911 CAGCAGGCTGGGTAGGTGCGCTGC----TTGTCT-TGTTCACCGTGTTTA    955

BSNT_01714___    956 TTACGGGCATTCAGCTTCTGCCGCTCTT--CG--GCCACTTTGACCATCT   1001
                     |.||.||..|.|||||..|||||   ||  ||  | |||||||.|||.||
BPUM_0952___e    956 TCACAGGTGTCCAGCTAGTGCCG---TTAACGAAG-CACTTTGCCCACCT   1001

BSNT_01714___   1002 GGCGCTTCAAGAGCTGTACCCTGT---GAAAAAAGAAACAAAGCTGAAAA   1048
                     ..|..|.||.|..||.||.|||||   ..||.||||||...|.|.|   |
BPUM_0952___e   1002 TTCTTTACAGGCACTTTATCCTGTTGCTCAACAAGAAAAGGATCGG---A   1048

BSNT_01714___   1049 GCTAT----TTCTC-TCTATTAAAAAC-TGCACTTAGTATTCAAGCG---   1089
                     |||.|    ||||| ||..|    ||| ||  ||.|..||.|||.||   
BPUM_0952___e   1049 GCTTTTTTATTCTCGTCCGT----AACGTG--CTCATCATCCAATCGATA   1092

BSNT_01714___   1090 CTGCTGATGTCTGTTGCATCTGCCTATGCAGCCGGCTTGACCGGTTTTC-   1138
                     .||||||  .||| ||||..|  |||     |||||..||  ||.|..| 
BPUM_0952___e   1093 TTGCTGA--GCTG-TGCAGTT--CTA-----CCGGCAGGA--GGATGGCA   1130

BSNT_01714___   1139 ------TGTACGCGCTGATCGGTTCTGCCGTTCTGATTT--TTG----TT   1176
                           ||.||             .||||.|||||||||  |||    ||
BPUM_0952___e   1131 GGGAAGTGGAC-------------TTGCCCTTCTGATTTCATTGGCATTT   1167

BSNT_01714___   1177 GT--TTTGCCTGCTT------ATATG-ACAACCAG--GCTGAAAAAGCAC   1215
                     ||  ||..||| |||      |||.| ||  .|||  |.|.|||      
BPUM_0952___e   1168 GTGCTTGTCCT-CTTCAAGCCATACGTAC--TCAGTCGATTAAA------   1208

BSNT_01714___   1216 GGAAAGCTGTGA---   1227
                       ||||.||.||   
BPUM_0952___e   1209 --AAAGATGAGATAG   1221


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