Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01738 and BPUM_0965

See Amino acid alignment / Visit BSNT_01738 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:14
# Commandline: needle
#    -asequence dna-align/BSNT_01738___gltT.1.24716.seq
#    -bsequence dna-align/BPUM_0965___gltT.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01738___gltT-BPUM_0965___gltT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01738___gltT-BPUM_0965___gltT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01738___gltT
# 2: BPUM_0965___gltT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1315
# Identity:     964/1315 (73.3%)
# Similarity:   964/1315 (73.3%)
# Gaps:          50/1315 ( 3.8%)
# Score: 3429.5
# 
#
#=======================================

BSNT_01738___      1 ATGAAAAGAATT-AAGTTTGGATTAGCCACACAAATATTCGTTGGACTTA     49
                     ||||||| |||| ||.|||||||||||.||||||||..|..|.||.||||
BPUM_0965___g      1 ATGAAAA-AATTAAAATTTGGATTAGCTACACAAATCCTAATCGGTCTTA     49

BSNT_01738___     50 TTCTAGGTGTCATTGTTGGCG---TCATTT--GGTATGGCAACCCA-GCA     93
                     ||||.||||||.|||||||.|   ||.|||  |||     |||||| ||.
BPUM_0965___g     50 TTCTCGGTGTCGTTGTTGGGGCAATCTTTTTCGGT-----AACCCAGGCG     94

BSNT_01738___     94 TTGCCTACTTACCTGCAGCCAATCGGGGATCTCTTTTTACGCTTAATCAA    143
                     ||| ..|||||..|..|.|||||.||.||..||||.|||.|..|.||.||
BPUM_0965___g     95 TTG-AGACTTATTTAAAACCAATTGGAGACTTCTTCTTAAGACTCATTAA    143

BSNT_01738___    144 AATGATAGTGATTCCTATTGTTGTCTCCAGCTTAATCATCGGTGTAGCCG    193
                     .|||||.|||||.||.|||||.||.||.||||||||..|.|||||.||.|
BPUM_0965___g    144 GATGATTGTGATACCAATTGTCGTATCTAGCTTAATTTTAGGTGTTGCAG    193

BSNT_01738___    194 GTGCAGGAAATGGAAAGCAAGTCGGTAAATTAGGCTTCAGAACGATTCTG    243
                     ||||.||..||||.||..|.||.||.|||.|.||.||.|||||.|||||.
BPUM_0965___g    194 GTGCCGGTGATGGTAAAAAGGTAGGGAAACTTGGTTTTAGAACCATTCTT    243

BSNT_01738___    244 TACTTCGAGATCATCACGACTTTTGCCATTATTCTCGGACTAGCCCTTGC    293
                     ||.||.||.||.|||||.||.|||||.||||||||.||.||.|..|||||
BPUM_0965___g    244 TATTTTGAAATTATCACAACATTTGCGATTATTCTTGGTCTTGTGCTTGC    293

BSNT_01738___    294 AAACATCTTCCATCCGGGTACAGGAGTTAATAT-----ACACGAAGCTCA    338
                     ||||.|..|.||.||.|||.||||.|||.|..|     |.|||     .|
BPUM_0965___g    294 AAACTTTGTTCAACCTGGTGCAGGCGTTGACTTTGGTCATACG-----GA    338

BSNT_01738___    339 AAAATCGGACATCAGTCAATATGTTGAAACTGAAAAAGAACAAAGTAATA    388
                     ||||...||.||.||.||.|||||||||||.||||||||||||||....|
BPUM_0965___g    339 AAAACAAGATATTAGCCAGTATGTTGAAACGGAAAAAGAACAAAGCGGCA    388

BSNT_01738___    389 AATCAGTGGCAGAAACGTTCCTCCATATTGTGCCGACAAACTTCTTCCAG    438
                     |||||.|.||.||.||||||||.|||||.||.||.||.|||||||||||.
BPUM_0965___g    389 AATCAATTGCTGATACGTTCCTACATATCGTTCCAACGAACTTCTTCCAA    438

BSNT_01738___    439 TCATTGGTCGAAGGGGATCTTCTAGCCATCATTTGCTTTACAGTACTATT    488
                     |||||||..|||||.|||.|.||.||.||.||||.||||||.||..||||
BPUM_0965___g    439 TCATTGGCGGAAGGTGATTTGCTTGCGATTATTTTCTTTACTGTGTTATT    488

BSNT_01738___    489 TGCATTGGGTATTTCCGCAATCGGTGAAAGAGGCAAGCCTGTATTAGCCT    538
                     ||||.|.||..||||.||.||.||||||.|.|||||.||.||..|.||||
BPUM_0965___g    489 TGCACTTGGCGTTTCAGCCATTGGTGAACGCGGCAAACCAGTGCTCGCCT    538

BSNT_01738___    539 TTTTTGAAGGTGTATCCCATGCCATGTTCCACGTTGTAAACCTTGTGATG    588
                     |.|||||||||||.||.||.|||||||||||.||.||.||..||||.|||
BPUM_0965___g    539 TCTTTGAAGGTGTGTCACACGCCATGTTCCATGTCGTCAATGTTGTAATG    588

BSNT_01738___    589 AAAGTGGCGCCATTCGGCGTTTTCGCTCTTATCGGAGTGACTGTGTCTAA    638
                     ||||..||.|||||.||.||.|||||.||.||.||.||||||||.||.||
BPUM_0965___g    589 AAAGCTGCACCATTTGGTGTCTTCGCACTCATTGGTGTGACTGTCTCAAA    638

BSNT_01738___    639 ATTCGGACTCGGTTCTCTTATCTCTCTCGGAAAGCTCGTTGGATTGGTTT    688
                     |||.||.||.|..||||||||.||..|.||.|||||.||.||..|.||||
BPUM_0965___g    639 ATTTGGTCTTGAATCTCTTATTTCATTAGGTAAGCTTGTGGGTCTTGTTT    688

BSNT_01738___    689 ATGTCGCGCTTGCTTTCTTCTTAATTGTTATTTTCGGGATTGTCGCAAAA    738
                     ||.|.|||||.|||.|||||.|.||.|||.|.|||||.|||.|.|.|||.
BPUM_0965___g    689 ATTTTGCGCTCGCTCTCTTCCTTATCGTTGTATTCGGAATTATTGGAAAG    738

BSNT_01738___    739 ATTGCCGGCATCAGCATCTTCAAGTTCCTTGCTTACATGAAGGACGAAAT    788
                     ||....|||.|.|..||.||||..||.||||||||||||||.||||||||
BPUM_0965___g    739 ATGATTGGCGTTAATATTTTCAGATTTCTTGCTTACATGAAAGACGAAAT    788

BSNT_01738___    789 -CTTACTGGCGTTCAGTACGTCCAGCTCTGAAACGGTTCTTCCGCGCATC    837
                      ||| ||.||.||.|||||.||||||||||||||.|||.|.||..|..||
BPUM_0965___g    789 GCTT-CTTGCCTTTAGTACATCCAGCTCTGAAACAGTTTTACCAAGAGTC    837

BSNT_01738___    838 ATGGAAAAAATGGAGAAAATCGGATGTCCGAAAGGAATTGTTTCATTTGT    887
                     |||||.|||||||||...||.|||||||||||.|||||||||||.||.||
BPUM_0965___g    838 ATGGATAAAATGGAGCGCATTGGATGTCCGAAGGGAATTGTTTCTTTCGT    887

BSNT_01738___    888 CATTCCGATCGGTTACACGTTTAACTTAGACGGTTCCGTTCTCTATCAAT    937
                     .||.||.||||||||.||.||||||||.|||||.|||||..|.||||||.
BPUM_0965___g    888 TATCCCAATCGGTTATACATTTAACTTGGACGGCTCCGTCTTGTATCAAG    937

BSNT_01738___    938 CTATTGCCGCACTCTTTTTAGCACAGGTATATGGCATTGATTTGACGATT    987
                     |.||.||.||.||.||..|.||||||||||||||||||||..|.||.|||
BPUM_0965___g    938 CGATCGCTGCGCTTTTCCTTGCACAGGTATATGGCATTGACCTTACAATT    987

BSNT_01738___    988 TGGCACCAGATTACGCTTGTGCTCGTCTTAATGGTGTCATCTAAAGGGAT   1037
                     ...||.|||.|.||.|||.|.||.||..|.||||||.||||||||||.||
BPUM_0965___g    988 GTCCAGCAGCTCACACTTATTCTTGTGCTGATGGTGACATCTAAAGGAAT   1037

BSNT_01738___   1038 GGCTGCCGTGCCTGGTACTTCTTTTGTTGTCTTGCTTGCAACGCTTGGCA   1087
                     |||||||||.||||||||.||.||||||||.||.|||||.||..|.||||
BPUM_0965___g   1038 GGCTGCCGTTCCTGGTACATCCTTTGTTGTATTACTTGCCACATTAGGCA   1087

BSNT_01738___   1088 CCATCGGCGTTCCGGCTGAAGGACTTGCCTTTATTGCCGGCGTAGACCGC   1137
                     |.|||||.||.||.||.|||||.||.||.||||||||.||.|||||.||.
BPUM_0965___g   1088 CAATCGGTGTACCTGCCGAAGGTCTAGCATTTATTGCAGGTGTAGATCGA   1137

BSNT_01738___   1138 ATCATGGATATGGCACGAACAGTTGTCAACCTGACTGGTAACGCGCTTGC   1187
                     ||||||||||||||||||||||||||.|||.|.||.||.||.||.|||||
BPUM_0965___g   1138 ATCATGGATATGGCACGAACAGTTGTTAACTTAACAGGAAATGCACTTGC   1187

BSNT_01738___   1188 TGCCGTTGTGATGTCTAAATGGGAAGGCATGTTTAAT-----CCTGCGAA   1232
                     .||.|||||||||||||||||||||||     |.|||     ||||..||
BPUM_0965___g   1188 AGCAGTTGTGATGTCTAAATGGGAAGG-----TCAATATGACCCTGAAAA   1232

BSNT_01738___   1233 AGCAGAAACTGTTATGTCCCAATCGAAAA-------CAGAACAAAACGCA   1275
                     ||.|.|....||.|||    |.|.||.||       |.|||| .|||.||
BPUM_0965___g   1233 AGGACATCGCGTGATG----ACTGGACAAGATGTACCTGAAC-CAACACA   1277

BSNT_01738___   1276 ACCATTTCTGGTTAA   1290
                     .|  ||||..|.|||
BPUM_0965___g   1278 GC--TTTCAAGCTAA   1290


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