Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00676 and BPUM_0986
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:27
# Commandline: needle
# -asequence dna-align/BSNT_00676___yclP.1.24716.seq
# -bsequence dna-align/BPUM_0986___yclP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00676___yclP-BPUM_0986___yclP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00676___yclP-BPUM_0986___yclP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00676___yclP
# 2: BPUM_0986___yclP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 802
# Identity: 520/802 (64.8%)
# Similarity: 520/802 (64.8%)
# Gaps: 86/802 (10.7%)
# Score: 1526.0
#
#
#=======================================
BSNT_00676___ 1 ATGGT--------AGAG-GTCAGAAA----TGTAAGCAAACAATATGGCG 37
||||| ||.| |||||.|| |.||| ||
BPUM_0986___y 1 ATGGTCTTGATGAAGGGCGTCAGTAAGGCGTATAA-------------CG 37
BSNT_00676___ 38 GGAAAGTTGTTCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATC 87
|.|||...||.|||.|.||.||..||.|||...|..||||.||..|..|.
BPUM_0986___y 38 GAAAAACAGTGCTTCACGACACAACAATCAGTGTGAAAAAAGGACAGCTG 87
BSNT_00676___ 88 ACCTCGTTTATCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTAT 137
|||||..|.||.|||||.||.||.||.||.|||||.||.||..|.||.||
BPUM_0986___y 88 ACCTCTCTCATTGGTCCGAATGGTGCGGGAAAAAGCACACTTTTATCCAT 137
BSNT_00676___ 138 CATGAGCCGCCTGAT-----CAAAAAGGATTCCGGCG-AGATTTACATAG 181
||||||||||||||| || ||.||.||.| || .|||..|||
BPUM_0986___y 138 CATGAGCCGCCTGATTCAGCCA-----GACTCAGGTGCAG-CTTATTTAG 181
BSNT_00676___ 182 ACGGACAAG--AGATTGGAGCATGT------GACAGTAAAGAGCTTGCCA 223
| .|||||| |.|| |||..|| .|||| ||.||.||.|
BPUM_0986___y 182 A-AGACAAGCCATAT---AGCGCGTACCCACCACAG----GAACTAGCGA 223
BSNT_00676___ 224 AGAAAATGAGCATTTTGAAGCAGGCGAACCAAATCAATATCAGGCTCA-C 272
|.||.|||||||||||.||||||||.||.||.||.|.|.|..|.||.| |
BPUM_0986___y 224 AAAAGATGAGCATTTTAAAGCAGGCCAATCATATGAGTGTGCGTCTGACC 273
BSNT_00676___ 273 GATCAAAGACCTCGTCAGTTTTGGCAGGTTTCCGTACTCACAGGGCCGGC 322
|.|| ..||.||.|||||.||||||.|.|||||.|||||||||||||...
BPUM_0986___y 274 GTTC-GGGAGCTTGTCAGCTTTGGCCGTTTTCCTTACTCACAGGGCCATT 322
BSNT_00676___ 323 TGAC---AGAGGA--AGACTGGGTTCATATCAACCAGG----CGCTCAGC 363
|||| |.|||| ||| |.||.|.|.|.| |..||||
BPUM_0986___y 323 TGACAAAAAAGGATGAGA--------AAATGATCGATGTGTCCCTTCAG- 363
BSNT_00676___ 364 TATATGAAGCTGGAAGACAT-TCAAGACA--AATACTTGGATCAGCTGAG 410
||.|||||||| ||...|| ||.|| || ||||..|.|||.|.|||||
BPUM_0986___y 364 TACATGAAGCT--AACCAATATCCAG-CATCAATATGTTGATGAACTGAG 410
BSNT_00676___ 411 CGGCGGACAGTGCCAAAGGGCATTTATCGCCATGGTCATTGCCCAGGACA 460
|||||||||..|.|||||.||.|||||.||.|||||..|.||.|||||.|
BPUM_0986___y 411 CGGCGGACAAAGACAAAGAGCCTTTATTGCAATGGTGCTGGCGCAGGATA 460
BSNT_00676___ 461 CAGATTATATTTTTCTGGATGAGCCGCTGAACAATCTGGATATGAAACAC 510
|||||||||||||..|.||||||||..|.||||||.||||||||||.||.
BPUM_0986___y 461 CAGATTATATTTTCTTAGATGAGCCTTTAAACAATTTGGATATGAACCAT 510
BSNT_00676___ 511 TCAGTTGAAATTATGAAACTGCTGAAACGGCTGGTAGAGGAGCTTGGAAA 560
||.||.||.||.|||||.||..|..|.|.|||.||..|.||||||||.||
BPUM_0986___y 511 TCTGTCGAGATGATGAAGCTCTTTCAGCAGCTCGTCAAAGAGCTTGGGAA 560
BSNT_00676___ 561 AACGATCGTCATCGTTATTCACGATATCAATTTTGCTTCAGTCTATTCTG 610
|||.||.||..|.||..|.||.|||||.||.|||||.||.||.|||||.|
BPUM_0986___y 561 AACCATTGTTGTAGTGCTCCATGATATTAACTTTGCCTCTGTGTATTCCG 610
BSNT_00676___ 611 ACCATATCGTCGCTTTGAAAAACGGCCGAA---TCGTAAAAGAAGGACCA 657
|.||||||||||||||.|||.|.| ||| ||.|.|.||||||...|
BPUM_0986___y 611 ATCATATCGTCGCTTTAAAAGATG---GAAAGGTCATCACAGAAGGCGGA 657
BSNT_00676___ 658 CCTGAAGAAATGATAGAAACATCAGTGCTTGAGGAAATCTACGATATGAC 707
...||.|||.||||..|||||..||..|||||..||||.||.||.|||..
BPUM_0986___y 658 GTGGATGAAGTGATTCAAACAGAAGCACTTGAACAAATTTATGACATGCG 707
BSNT_00676___ 708 CATCCCGATTCAGACGATTGATAATCAAAGAATAGGTGTCTATTTTTCTT 757
.||.||||||.|.|..|||.|...|.|..|.||..|..|.||||||||||
BPUM_0986___y 708 TATACCGATTGAAATCATTCACGGTGAGCGCATTTGCTTATATTTTTCTT 757
BSNT_00676___ 758 AA 759
||
BPUM_0986___y 758 AA 759
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