Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01862 and BPUM_1029

See Amino acid alignment / Visit BSNT_01862 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:22
# Commandline: needle
#    -asequence dna-align/BSNT_01862___yitL.1.24716.seq
#    -bsequence dna-align/BPUM_1029___yitL.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01862___yitL-BPUM_1029___yitL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01862___yitL-BPUM_1029___yitL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01862___yitL
# 2: BPUM_1029___yitL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 853
# Identity:     624/853 (73.2%)
# Similarity:   624/853 (73.2%)
# Gaps:           8/853 ( 0.9%)
# Score: 2166.0
# 
#
#=======================================

BSNT_01862___      1 ATGAGACCAGGGCAGCAATTAACCTTGAGTATAGATCACCAAACCGACTT     50
                     |||||||||||..|||||.|.||||||...|||||..||.|.|..||.|.
BPUM_1029___y      1 ATGAGACCAGGTGAGCAACTGACCTTGCAAATAGAGAACGAGATGGAATA     50

BSNT_01862___     51 CGGTTACTTTTTAACCGATGGGGAAGATACGATTCTCTTACATAACAGTG    100
                     |||.||||||||.||.|||||.||||||.||.|.|||||.||....||||
BPUM_1029___y     51 CGGCTACTTTTTGACAGATGGTGAAGATTCGGTCCTCTTGCACCGTAGTG    100

BSNT_01862___    101 AAATGACTGAGGATATCGGGGACAGAGACGAAGTAGAAGTCTTTATATAC    150
                     |||||||.||.|||||.|..|||..|||.||||||||.||||...|||||
BPUM_1029___y    101 AAATGACAGAAGATATTGATGACCAAGATGAAGTAGAGGTCTACTTATAC    150

BSNT_01862___    151 GTCGACCAGCAGGAAAGGCTTGCGGCCACGATGAAAATTCCGGTCATCAG    200
                     ||.||.||..|.||||||||.||.||.|||||||||||.|||...||||.
BPUM_1029___y    151 GTAGATCATGAAGAAAGGCTAGCTGCAACGATGAAAATACCGACAATCAA    200

BSNT_01862___    201 CGCGGATGAATATGGCTGGGTTGAAGTGGTGGATAAAGTGGAAGATATGG    250
                     .|||.||..||||||||||||.|||||.||.||....||.|||||.||||
BPUM_1029___y    201 TGCGCATACATATGGCTGGGTAGAAGTCGTAGACGTCGTAGAAGACATGG    250

BSNT_01862___    251 GCGTTTTCGTTGATGTCGGTTTATCGAAGGACGCACTAGTCGCAACTGAG    300
                     |.|..||.||.|||||.||.||.||.|||||.|||||.||||||||.||.
BPUM_1029___y    251 GTGCATTTGTGGATGTTGGCTTGTCAAAGGATGCACTTGTCGCAACAGAA    300

BSNT_01862___    301 CATTTGCCGCCGTATGAAGATGTCTGGCCGCAAAAAGGGGACAAACTTTA    350
                     |||.|.||.||.|.|||.||.|..||||||.|||||||.|||||||||||
BPUM_1029___y    301 CATCTCCCTCCTTTTGAGGAAGCATGGCCGAAAAAAGGAGACAAACTTTA    350

BSNT_01862___    351 CTGTATGCTGAAGGTGACGAACCGGGGGCGCATGTTTGCGAAACCAGCGC    400
                     ||||||||||||.||.||.|.|...||..|.|||||.|||||.|||||..
BPUM_1029___y    351 CTGTATGCTGAAAGTCACAAGCTACGGTAGAATGTTCGCGAAGCCAGCCA    400

BSNT_01862___    401 CGGAAGATATCATCAGCGAACTGTTTACCGACGCTTCAGAAGATC-TGAT    449
                     |.||||||.|.|||||.||..|.|||||.||.||..|.||| |.| |.||
BPUM_1029___y    401 CAGAAGATGTGATCAGTGACTTATTTACTGAGGCACCCGAA-ACCTTAAT    449

BSNT_01862___    450 GAATAAAGAGCTGACAGGTACGGTGTACAGGCTGATCGCATCGGGTTCAT    499
                     |||.|||||..|.||.||.||..|.||..|..|.||.||..|.||.||.|
BPUM_1029___y    450 GAACAAAGAAATCACTGGAACAATTTATCGCTTAATTGCGACAGGCTCGT    499

BSNT_01862___    500 TCGTGATCACGGATGAC-GGTATCCGCTGTTTTATTCACCCGTCAGAAAG    548
                     |..||.|.||.||| || ||..|.||..|.|||||.||||.|.|||||.|
BPUM_1029___y    500 TTATGCTGACAGAT-ACAGGGGTGCGAGGGTTTATCCACCGGACAGAACG    548

BSNT_01862___    549 AAAAGAGGAGCCAAGACTGGGTTCAAAAGTCACAGGCCGGGTGATTCAAG    598
                     |||.||.|||||||||.|.||.||.|..||.|||||.||.||.|||..||
BPUM_1029___y    549 AAAGGAAGAGCCAAGATTAGGATCGACCGTGACAGGACGCGTCATTGCAG    598

BSNT_01862___    599 TGAAAGAAGACGGTTCAGTCAACTTGTCGCTGCTTCCGAGAAAACAGGAT    648
                     |||||||.||.||..|.||.|||.||||.||||||||.|||||||||||.
BPUM_1029___y    599 TGAAAGAGGATGGAACTGTGAACGTGTCTCTGCTTCCTAGAAAACAGGAA    648

BSNT_01862___    649 GCAATGTCTGTTGATGCTGAGTGCATTC-TAACGTATATGAGAATGAGAA    697
                     ||..|.|||||.|||||.|| .|.|.|| ||||.||||||||||.|||||
BPUM_1029___y    649 GCGTTATCTGTCGATGCAGA-AGAAATCTTAACTTATATGAGAACGAGAA    697

BSNT_01862___    698 ACGGTGCCATGCCGTACAGTGACAAAAGCCAGCCTGACGATATCAGAGAA    747
                     |.|||||.|||||.||..|.||.||||||.|.||.||.||.|||.|.|||
BPUM_1029___y    698 ATGGTGCGATGCCTTATGGAGATAAAAGCGATCCAGAAGACATCCGCGAA    747

BSNT_01862___    748 CGTTTTAATATGAGCAAAGCCGCCTTTAAACGCGCGCTGGGCCATTTGAT    797
                     ||.||..|.||||||||.||.|||||||||||.||..|.||.||||||||
BPUM_1029___y    748 CGATTCCAAATGAGCAAGGCAGCCTTTAAACGGGCATTAGGTCATTTGAT    797

BSNT_01862___    798 GAAAAACGGAAAAGTGTATCAGGAAAATGGATGGACATACGAGAAAAAAT    847
                     |||||||||...|||.||.||..||.|.||.|||||||||||||||||||
BPUM_1029___y    798 GAAAAACGGCCTAGTCTACCAAAAAGAGGGCTGGACATACGAGAAAAAAT    847

BSNT_01862___    848 AG-    849
                      | 
BPUM_1029___y    848 -GA    849


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