Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01866 and BPUM_1033

See Amino acid alignment / Visit BSNT_01866 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:23
# Commandline: needle
#    -asequence dna-align/BSNT_01866___yitT.1.24716.seq
#    -bsequence dna-align/BPUM_1033___yitT.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01866___yitT-BPUM_1033___yitT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01866___yitT-BPUM_1033___yitT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01866___yitT
# 2: BPUM_1033___yitT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 852
# Identity:     648/852 (76.1%)
# Similarity:   648/852 (76.1%)
# Gaps:          18/852 ( 2.1%)
# Score: 2430.0
# 
#
#=======================================

BSNT_01866___      1 ATGGTACTAGATC----AAACAAAAAAATTACTCA---TCGTCATCATCG     43
                     |||    |..|||    ||.|||||||   |||||   |||||.||||.|
BPUM_1033___y      1 ATG----TTCATCGGAGAAGCAAAAAA---ACTCATTGTCGTCGTCATTG     43

BSNT_01866___     44 GCGCTTTACTCAATGCTGCCGGGCTGAACTTATTTTTGATACCTGCAGAT     93
                     |.||..|.||||||||....||.|||||.|||||.||.||.||.||.|||
BPUM_1033___y     44 GTGCACTGCTCAATGCGATTGGACTGAATTTATTCTTAATCCCAGCTGAT     93

BSNT_01866___     94 GTATATGCCAGCGGATTTACAGGTGTTGCCCAGCTTTTATCAAGCGTCGT    143
                     |||||.||.|||||.||||||||.||.||||||.|.|||||.|||.|..|
BPUM_1033___y     94 GTATACGCGAGCGGGTTTACAGGGGTAGCCCAGTTGTTATCCAGCTTAAT    143

BSNT_01866___    144 TGATCAATATGCCCCCTTTTACATATCGACGGGAACGCTCTTGTTCCTCT    193
                     .|||||||||||.||.|||||.|||||.||.||.|..||.||.||..|.|
BPUM_1033___y    144 GGATCAATATGCGCCATTTTATATATCCACAGGGATTCTATTATTTATTT    193

BSNT_01866___    194 TAAACATTCCGGTCGGTATTTTAGGATGGCTGAAGGTCGGCAAATCGTTT    243
                     ||||.|||||.|||||.||||||||.|||.||||.||.|||...||.|||
BPUM_1033___y    194 TAAATATTCCAGTCGGCATTTTAGGCTGGATGAAAGTGGGCCGTTCCTTT    243

BSNT_01866___    244 ACAGTGTACAGCATTTTAAGTGTCGCACTCACTACTCTGTTTATGGGGAT    293
                     ||..|.|||||||||.|.|||||.|||||.||.||..|.||..|.||.||
BPUM_1033___y    244 ACGCTTTACAGCATTATCAGTGTTGCACTGACGACCATTTTCCTCGGAAT    293

BSNT_01866___    294 CCTGCCGGAAACAAGCCTGTCACATGACATTTTGCTGAACGCGGTGTTCG    343
                     |.|.||.|||||.||..||||||||||.||.||.||.||.||.|||||.|
BPUM_1033___y    294 CTTACCAGAAACGAGTGTGTCACATGATATATTACTAAATGCTGTGTTTG    343

BSNT_01866___    344 GCGGCGTCATTTCCGCAGTCGGTATCGGCTTAACATTAAAATACGGAGCT    393
                     |||||||.||.||||||||.||.||.||..|.||..|.||||||||.||.
BPUM_1033___y    344 GCGGCGTGATATCCGCAGTAGGGATTGGGATCACGCTCAAATACGGGGCA    393

BSNT_01866___    394 TCGACAGGCGGGCTTGATATCGTCGCCATGGTGCTTGCAAAGTGGAAGGA    443
                     |||||||||||.||.||.|||||.||.|||||..|.||.||.||||||||
BPUM_1033___y    394 TCGACAGGCGGACTCGACATCGTTGCTATGGTTTTAGCGAAATGGAAGGA    443

BSNT_01866___    444 TAAACCCGTCGGCACGTATTTCTTCATTCTGAACGGGATTATCATCTTGA    493
                     ||||||.|||||||||||||||||||||.|.||.||.||.||.||.||.|
BPUM_1033___y    444 TAAACCAGTCGGCACGTATTTCTTCATTTTAAATGGTATCATTATTTTTA    493

BSNT_01866___    494 CGGCAGGATTATTGCAAGGTTGGGAGAAAGCATTATATACCCTGGTTACA    543
                     |.|||||||||||.|||||||||||||||||||||||||||||.||||||
BPUM_1033___y    494 CAGCAGGATTATTACAAGGTTGGGAGAAAGCATTATATACCCTTGTTACA    543

BSNT_01866___    544 CTATATGTGACAACGAGGGTGATCGACGCAATTCACACTCGCCACAT--G    591
                     .||||||||||.||.|||||.||.||.||.||.||.||..|  ||||  |
BPUM_1033___y    544 TTATATGTGACCACAAGGGTCATTGATGCCATCCATACAAG--ACATGAG    591

BSNT_01866___    592 AAGCTTACGGCAATGATTGTGACGAAAAAAGCGGACGAAATCAAGGAAGC    641
                     |||||.||.||.||||||||||||||.||.||.||.||||||||||||||
BPUM_1033___y    592 AAGCTGACTGCGATGATTGTGACGAAGAAGGCAGATGAAATCAAGGAAGC    641

BSNT_01866___    642 CATTTACGGAAAAATGGTGCGCGGCATCACAACTGTTCCGGCAAAAGGAG    691
                     .|||||.|||||||||||..|.|||||.||.|||||.||.|||||.||||
BPUM_1033___y    642 TATTTATGGAAAAATGGTCAGAGGCATTACGACTGTACCTGCAAAGGGAG    691

BSNT_01866___    692 CTTTTACGAACGAACAGAAAGAAATGATGATTATCGTCATCACGAGGTAT    741
                     |||||||.|||||.|..||||||||||||.|.|||||.||.||.||||||
BPUM_1033___y    692 CTTTTACCAACGAGCCAAAAGAAATGATGGTGATCGTTATTACAAGGTAT    741

BSNT_01866___    742 GAACTGTACGATTTAGAAAAGATCGTCAAAGAAGTTGATCCGAAAGCATT    791
                     ||.|||||.||..|.|||.|.||..|.||||||||.|||||.|||||.||
BPUM_1033___y    742 GAGCTGTATGAACTTGAACAAATTATTAAAGAAGTCGATCCAAAAGCCTT    791

BSNT_01866___    792 TACGAACATCGTTCAAACGACAGGGATTTTTGGTTTCTTTAGAAAAGACT    841
                     |||.||.||.||.|||||.||....|||.||||.||.||.|||..|||.|
BPUM_1033___y    792 TACAAATATTGTGCAAACAACTAATATTCTTGGATTTTTCAGACGAGATT    841

BSNT_01866___    842 GA    843
                     .|
BPUM_1033___y    842 AA    843


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01866 and BPUM_1033

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
