Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01888 and BPUM_1049

See Amino acid alignment / Visit BSNT_01888 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:25
# Commandline: needle
#    -asequence dna-align/BSNT_01888___yjzC.1.24716.seq
#    -bsequence dna-align/BPUM_1049___yjzC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01888___yjzC-BPUM_1049___yjzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01888___yjzC-BPUM_1049___yjzC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01888___yjzC
# 2: BPUM_1049___yjzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 187
# Identity:     131/187 (70.1%)
# Similarity:   131/187 (70.1%)
# Gaps:          14/187 ( 7.5%)
# Score: 413.5
# 
#
#=======================================

BSNT_01888___      1 GTGGGACAGCAGCACC-----AATTCCGGCCCGGACAGAAAGCGCCTAAT     45
                     .||||.||||||||.|     ||.||.|    ||| |.|||||.||.|||
BPUM_1049___y      1 ATGGGTCAGCAGCATCAGTTTAAATCAG----GGA-ATAAAGCACCAAAT     45

BSNT_01888___     46 AACGGTGTCTACGTAGAAATCGGCGAGACAGGGAGCATGGTTAAAAACCC     95
                     ||.|||||.|||||.||.|||||.||.||.||.||.|||||.|||.|.||
BPUM_1049___y     46 AATGGTGTGTACGTCGAGATCGGTGAAACCGGCAGTATGGTGAAAGATCC     95

BSNT_01888___     96 TCAAAAGGTCCATCTGTC-AGCAGGGGAAATGTTCCCCGA-AACATCAAA    143
                     |..||||.|..|.|| || ||||||.||..|.||.||.|| ||| ||.||
BPUM_1049___y     96 TTTAAAGATTAAGCT-TCAAGCAGGCGATGTCTTTCCGGATAAC-TCGAA    143

BSNT_01888___    144 CCACAACCGGCTGTGGACCTACAAAAGAAAGCCGTGA    180
                     |||.|||||..|.||||||||..|.||||||||.|.|
BPUM_1049___y    144 CCATAACCGTGTTTGGACCTATCAGAGAAAGCCATAA    180


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