Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01889 and BPUM_1051
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:25
# Commandline: needle
# -asequence dna-align/BSNT_01889___yjzD.1.24716.seq
# -bsequence dna-align/BPUM_1051___yjzD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01889___yjzD-BPUM_1051___yjzD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01889___yjzD-BPUM_1051___yjzD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01889___yjzD
# 2: BPUM_1051___yjzD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 204
# Identity: 125/204 (61.3%)
# Similarity: 125/204 (61.3%)
# Gaps: 27/204 (13.2%)
# Score: 318.0
#
#
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BSNT_01889___ 1 GTGCGATATATTATTGCCTTTATTTGGACGTTCCTTTTATCACATATGGC 50
.|||..||||||||..||.|.||||||||.||.||..|..||||||||||
BPUM_1051___y 1 ATGCATTATATTATCACCCTCATTTGGACTTTTCTGCTGACACATATGGC 50
BSNT_01889___ 51 ATGCTACTTGGTTGCAAGCATGAACAGCGTTACGTAT-AATTTCAAAACA 99
..|.|||.|.|||||....|||||..|||.|.|.||| |.||| ||.
BPUM_1051___y 51 TGGTTACATCGTTGCTTCGATGAATGGCGCTGCTTATGACTTT----ACT 96
BSNT_01889___ 100 T---CATCTGT-----CATTGCTGTTGTACTGTATGTCTTAATCATGGTT 141
| |.|||.| ||.||.|||| |||.|| |.|.|||.||| |.
BPUM_1051___y 97 TTGACTTCTATTCTTGCAGTGGTGTT-TACGGT-TATTTTATTCA---TC 141
BSNT_01889___ 142 TTAGCAGAAATCATGCCTATGAACAAAAATGCAAG-CCAGCA-------- 182
||.||.|||.|.|..||.|||||..|||..|.||| .||.||
BPUM_1051___y 142 TTTGCTGAAGTAAGTCCAATGAAAGAAACGGAAAGTTCAACAAAACACTC 191
BSNT_01889___ 183 TTAA 186
||||
BPUM_1051___y 192 TTAA 195
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