Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01951 and BPUM_1097
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:29
# Commandline: needle
# -asequence dna-align/BSNT_01951___thiS.1.24716.seq
# -bsequence dna-align/BPUM_1097___thiS.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01951___thiS-BPUM_1097___thiS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01951___thiS-BPUM_1097___thiS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01951___thiS
# 2: BPUM_1097___thiS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 211
# Identity: 138/211 (65.4%)
# Similarity: 138/211 (65.4%)
# Gaps: 14/211 ( 6.6%)
# Score: 352.0
#
#
#=======================================
BSNT_01951___ 1 ATGATGCTACAGCTGAACGGTAAAGACGTGAAGTGGGAAAAAGACGCA-G 49
||||...|.||..||||.||.|.|..|||..|.|..||..|||| |.| |
BPUM_1097___t 1 ATGAAAATTCAATTGAATGGCAGAATCGTTGATTTCGATCAAGA-GAATG 49
BSNT_01951___ 50 GTACAATTCAAGACCTGCTGGC-GTCTTATCAGCTTGATAATAAAATCGT 98
|.||.||..|.||.|||||..| |.| |||||||||||.|||..|.|.||
BPUM_1097___t 50 GAACGATCTATGATCTGCTAACAGAC-TATCAGCTTGAAAATCGAGTAGT 98
BSNT_01951___ 99 TATCGTGGAAAGAAATAAAGAAATAATCGGGAAAGAACGC-TATC-ACGA 146
.||.||.||||..||..|||||||.||.|..|||||| || |.|| ||.|
BPUM_1097___t 99 GATTGTAGAAAAGAACCAAGAAATTATTGATAAAGAA-GCGTTTCAACAA 147
BSNT_01951___ 147 GGTTGAGCTTTGTGATCGTGATGTC---ATTGAAATTGTCCATTTTGTAG 193
| |||...| |.|.|.|.|||.| ||.|||||.||.||.|||||||
BPUM_1097___t 148 G--TGAAAAT--TCAACCTAATGACACGATCGAAATCGTTCACTTTGTAG 193
BSNT_01951___ 194 GAGGCGGATGA 204
||||.||||||
BPUM_1097___t 194 GAGGAGGATGA 204
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