Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02182 and BPUM_1185

See Amino acid alignment / Visit BSNT_02182 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:38
# Commandline: needle
#    -asequence dna-align/BSNT_02182___dppB.1.24716.seq
#    -bsequence dna-align/BPUM_1185___dppB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02182___dppB-BPUM_1185___dppB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02182___dppB-BPUM_1185___dppB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02182___dppB
# 2: BPUM_1185___dppB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 951
# Identity:     674/951 (70.9%)
# Similarity:   674/951 (70.9%)
# Gaps:          39/951 ( 4.1%)
# Score: 2342.5
# 
#
#=======================================

BSNT_02182___      1 TTGGCGCGATACATGA------------TAAAGCGTTTTTGGGCAATGGC     38
                                 ||||            |.||.||||||...||.|||..
BPUM_1185___d      1 ------------ATGACCAGCTTTTTGCTCAAACGTTTTATTGCGATGAT     38

BSNT_02182___     39 AGCTACGATTTTGGTGATTACCACCCTGACTTTTGTTCTCATGAAGGTCA     88
                     .||.||||||||...||||||.||..|.||.|||.||.|.||||||||||
BPUM_1185___d     39 TGCCACGATTTTAACGATTACGACGTTAACGTTTATTTTAATGAAGGTCA     88

BSNT_02182___     89 TTCCCGGATCTCCTTTTAACGAGGAGAGAGGCACAAATGAAGCCGTTCAA    138
                     |.||.|||||.||.||.||.||.||..||...|||||.|||.|||||||.
BPUM_1185___d     89 TCCCAGGATCGCCCTTCAATGAAGAACGAAATACAAACGAAACCGTTCAG    138

BSNT_02182___    139 AAAAATCTCGAAGCCTACTATCACTTAGACGATCCTCT-CATTTTCCAAT    187
                     ..|||.||||||..||||||||||||||||||.||.|| .||.|| ||||
BPUM_1185___d    139 CGAAACCTCGAAAGCTACTATCACTTAGACGAACCACTGTATGTT-CAAT    187

BSNT_02182___    188 ACATTTTCTACTTAAAATCCATCATTACATTCGATTTCGGACCTTCAATT    237
                     |..|..||||.||||||||||||.||||.||.|||||.||.|||||.|||
BPUM_1185___d    188 ATGTCATCTATTTAAAATCCATCGTTACCTTTGATTTTGGTCCTTCCATT    237

BSNT_02182___    238 AAAAAACCGTCGGACAGCGTAAATGATATGCTGGAACGCGGATTTCCCGT    287
                     |||||.||.||.||.||.||.||||||.|..|||...|.||.||.||.||
BPUM_1185___d    238 AAAAAGCCTTCTGAAAGTGTCAATGATCTATTGGCGAGAGGCTTCCCAGT    287

BSNT_02182___    288 TTCCTTTGAGCTTGGGATGACAGCGATTGTCATTGCTGTGATTTCTGGGC    337
                     .||.||.||.|||||..|.|...|.||..|.||||||||.||.||.||..
BPUM_1185___d    288 CTCATTAGAACTTGGTCTTATCTCAATATTGATTGCTGTCATCTCCGGCA    337

BSNT_02182___    338 TGGTGCTGGGCGTAATCGCTGCACTCCGCCGCAATGGGTTTTTGGACTAC    387
                     |..||||.||.||.||.|||||.|||||.|.||||||.||..|.||.||.
BPUM_1185___d    338 TTCTGCTAGGGGTCATGGCTGCCCTCCGGCACAATGGCTTGATTGATTAT    387

BSNT_02182___    388 GCCGCGATGAGTCTTGCAGTACTCGGCATCTCCATCCCGAATTTTATTCT    437
                     ..|||.||||...||||.||..||||.||.|||||.||.||.|||||..|
BPUM_1185___d    388 ATCGCCATGACCATTGCTGTTTTCGGTATATCCATTCCAAACTTTATCTT    437

BSNT_02182___    438 GGCAACATTGCTCATTCAGCAATTTGCTGTCAATCTCAAACTATTTCCCG    487
                     .||.||.||..|.||||||||..|||||||.|||.|.||.||.|||||..
BPUM_1185___d    438 TGCTACCTTATTAATTCAGCAGCTTGCTGTGAATTTGAAGCTCTTTCCTA    487

BSNT_02182___    488 CTGCCACATGGACGAGCCCGATTCATATGGTGCTTCCGACCGCAGCGCTT    537
                     |.||.|..|||||.||.|||||.|||||||||||.||.|||...||.|||
BPUM_1185___d    488 CAGCGATGTGGACAAGTCCGATGCATATGGTGCTACCAACCATTGCTCTT    537

BSNT_02182___    538 GCTGTAGGGCCAATGGCGATCATTGCCAGGCTGACACGGTCGAGCATGGT    587
                     ||.||..|.||.|||||.||.|||||..||.|.|||.|.|||||||||.|
BPUM_1185___d    538 GCCGTTAGTCCGATGGCCATAATTGCTCGGTTAACAAGATCGAGCATGAT    587

BSNT_02182___    588 CGAAGTTCTGACACAGGATTATATCCGCACAGCAAAAGCAAAAGGGCTTT    637
                     .|||||.|||.|.|||||.|||||.|||||.||.|||||||||||.||||
BPUM_1185___d    588 TGAAGTGCTGTCTCAGGACTATATTCGCACTGCTAAAGCAAAAGGACTTT    637

BSNT_02182___    638 CTCCGTTCAAAATTATCGTAAAACACGCACTCAGAAATGCACTCATGCCC    687
                     ||||.||.||||||.|..|.|||||.||.||..|||||||.||..||||.
BPUM_1185___d    638 CTCCCTTTAAAATTGTGTTCAAACATGCGCTTCGAAATGCGCTTTTGCCT    687

BSNT_02182___    688 GTCATTACCGTCCTGGGCACACTCGTCGCCAGCATCTTAACAGGAAGCTT    737
                     ||..|.|||.|.||.||||||||.|||||.|||||.|||||||||||.||
BPUM_1185___d    688 GTTGTGACCATTCTTGGCACACTTGTCGCAAGCATTTTAACAGGAAGTTT    737

BSNT_02182___    738 TGTCATTGAAAAAATCTTTGCCATTCCGGGAATGGGAAAATATTTTGTTG    787
                     |||||||||||||||||||||.|||||.||.|||||||||||.|||||.|
BPUM_1185___d    738 TGTCATTGAAAAAATCTTTGCGATTCCTGGCATGGGAAAATACTTTGTCG    787

BSNT_02182___    788 AAAGCATTAATCAGCGGGACTACCCCGTGATTATGGGAACGACCGTTTTT    837
                     |.||.|||||..|.||.||.||.||.||.|||||||||||.||.||||||
BPUM_1185___d    788 AGAGTATTAACAACCGTGATTATCCTGTCATTATGGGAACCACTGTTTTT    837

BSNT_02182___    838 TACAGCGTCATTCTGATTATCA-TGCTGTTTTTGGTCGATTTGGCCTACG    886
                     ||||||.|||||.|.||.| || |.||.||..|.||.|||.||||.||..
BPUM_1185___d    838 TACAGCATCATTTTAATCA-CACTTCTTTTCATTGTTGATGTGGCGTATC    886

BSNT_02182___    887 GTCT-CTTAGACCCGCGCATTAAACTGCATAAGAAAGGGTGA--------    927
                     |.|| ||| ||.|||.|.|||.|.||.|||.|||||||..||        
BPUM_1185___d    887 GCCTGCTT-GATCCGAGAATTCAGCTACATCAGAAAGGAGGAAAGGCATG    935

BSNT_02182___    927 -    927
                      
BPUM_1185___d    936 A    936


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