Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02183 and BPUM_1186
See
Amino acid alignment /
Visit
BSNT_02183 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:38
# Commandline: needle
# -asequence dna-align/BSNT_02183___dppC.1.24716.seq
# -bsequence dna-align/BPUM_1186___dppC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02183___dppC-BPUM_1186___dppC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02183___dppC-BPUM_1186___dppC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02183___dppC
# 2: BPUM_1186___dppC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1010
# Identity: 699/1010 (69.2%)
# Similarity: 699/1010 (69.2%)
# Gaps: 94/1010 ( 9.3%)
# Score: 2362.0
#
#
#=======================================
BSNT_02183___ 1 GTGAATCTCCCTGTACAAACGGATGAACGCCAGCCAGAA-CAGCACAATC 49
.|||.|.|.|.|.|.||...||||.|| ||||| |.|||...|.
BPUM_1186___d 1 ATGAGTATACATTTGCAGCAGGATCAA-------CAGAATCCGCATCCTG 43
BSNT_02183___ 50 AGGTGCCTGATGAGTGGTTTGTCT-CGAATCAGGAAA--AAAATCGGGAA 96
|.|||||.||.||.|||||| ||| |||...||.||| ||||| |||.
BPUM_1186___d 44 AAGTGCCGGACGATTGGTTT-TCTCCGAGAGAGCAAAAGAAAAT--GGAG 90
BSNT_02183___ 97 GCCGATTCGGTCAAGCGGCCGAGTTTGTCATACACGCAGGATGCCTGGAG 146
||..||.|..|.||..|.||...|.|.||.||...|..|||..|.|||||
BPUM_1186___d 91 GCACATGCCATTAAAAGACCCTCTCTTTCGTATTGGGCGGACACATGGAG 140
BSNT_02183___ 147 GAGGCTGAAAAAAAATAAATTAGCGATGGCCGGACTCTTTATTCTTT--- 193
..|.|||||..|||||||..|.|||||| ||||.|||.|
BPUM_1186___d 141 ACGACTGAAGCAAAATAAGCTTGCGATG---------TTTAGTCTATCCG 181
BSNT_02183___ 194 ------TATTTCTTTTTGTCATGACAGTTATCGGGCCCTTTTTATCGCCC 237
|.|||||||||.|||||.|| .|||..||||| ||.||
BPUM_1186___d 182 TATTGATTTTTCTTTTTATCATGGCA-CTATTAGGCCC-----ATTGC-- 223
BSNT_02183___ 238 CATAGTGTCGTACGCCAATCGC-TGACAGAA---------------CAAA 271
|.|.|| |.|||.|| |||||||| ||||
BPUM_1186___d 224 -------TTGCAC-CTAATAGCGTGACAGAACAGCGTCTTTCCATGCAAA 265
BSNT_02183___ 272 ATCTTCCGCCCTCAGCCGATCATTGGTTCGGCACCGATGAACTCGGCCGG 321
||||.|||||.||.||.|.|||.||||||||.||.|||||.||.||.||.
BPUM_1186___d 266 ATCTGCCGCCATCCGCTGCTCACTGGTTCGGAACGGATGAGCTTGGACGA 315
BSNT_02183___ 322 GATGTGTTTACCCGGACATGGTATGGCGCGAGAATCTCGTTGTTTGTCGG 371
|||||||||||.||.||||||||.||.|||.|.||.||.||.|||||.||
BPUM_1186___d 316 GATGTGTTTACACGTACATGGTACGGGGCGCGTATTTCTTTATTTGTAGG 365
BSNT_02183___ 372 CGTGATGGCAGCACTGATTGATTTTTTGATCGGTGTCATTTACGGAGGCG 421
|||.||||||||.||||||||||||...|||||.||.||.||.||||||.
BPUM_1186___d 366 CGTCATGGCAGCCCTGATTGATTTTGCTATCGGCGTGATCTATGGAGGCA 415
BSNT_02183___ 422 TTGCCGGCTATAAAGGCGGCAGGAT-TGACAGCA--TTATGATGCGGATT 468
|||||||.|||||.||.||.| ||| |||| || |.||||||||.||.
BPUM_1186___d 416 TTGCCGGTTATAAGGGAGGGA-GATATGAC--CATGTCATGATGCGAATC 462
BSNT_02183___ 469 ATCGAAGTGCTGTACGGACTGCCATACCTGCTTGTTGTCATTTTGCTGAT 518
.||||.|||||.|||||.||.||.||..|.||||||||||||||..||||
BPUM_1186___d 463 GTCGAGGTGCTCTACGGTCTTCCTTATTTACTTGTTGTCATTTTATTGAT 512
BSNT_02183___ 519 GGTGCTTATGGGGCCGGGACTGGGCACTATTATTGTGGCGCTGACTGTGA 568
|||.||.|||||.||.||.||.|.|||.||||||||.|||||.|||||.|
BPUM_1186___d 513 GGTTCTAATGGGACCAGGTCTTGTCACCATTATTGTAGCGCTCACTGTCA 562
BSNT_02183___ 569 CCGGATGGGTCGGCATGGCGAGAATTGTAAGAGGCCAGGTGCTTCAGATT 618
||||||||.|.||.|||||.|||||.||.|||||.||.||.|||||..|.
BPUM_1186___d 563 CCGGATGGATTGGAATGGCAAGAATCGTGAGAGGTCAAGTTCTTCAACTG 612
BSNT_02183___ 619 AAAAATTATGAATATGTACTCGCCTCGAAAACCTTTGGCGCGAAAACCTT 668
||||...|.||||||||.||.|||||.|||||.|||||.||.||.|.|.|
BPUM_1186___d 613 AAAAGCCAGGAATATGTCCTTGCCTCCAAAACTTTTGGTGCAAAGAGCCT 662
BSNT_02183___ 669 TCGCATCATCCGGAAGAATTTGCTGCCGAATACTATGGGAGCGATCATCG 718
.||||||||.||....||..|||||||||||||.||||||.||||.||||
BPUM_1186___d 663 GCGCATCATTCGCCGCAACCTGCTGCCGAATACGATGGGACCGATTATCG 712
BSNT_02183___ 719 TACAAATGACATTAACCGTACCTGCCGCCATATTCGCAGAATCATTTTTA 768
|.||.|||||.|||||.|||||..||||.|||||.||||||.|.||..||
BPUM_1186___d 713 TTCAGATGACTTTAACTGTACCAACCGCGATATTTGCAGAAGCGTTCCTA 762
BSNT_02183___ 769 AGCTTTCTCGGCCTCGGCATACAGGCTCCGTTTGCAAGTTGGGGCGTGAT 818
||||||||.||..|.|||||.||.||.|||||||||||.|||||||||||
BPUM_1186___d 763 AGCTTTCTTGGTTTAGGCATTCAAGCGCCGTTTGCAAGCTGGGGCGTGAT 812
BSNT_02183___ 819 GGCGAATGACGGCCTGCCCACGATTTTATC------TGGGCATTGGTGGC 862
|||.|||||.|..|||||.||..|..|.|| |||.||||||||||
BPUM_1186___d 813 GGCCAATGATGCGCTGCCGACAGTGCTGTCAGATAATGGACATTGGTGGC 862
BSNT_02183___ 863 GCCTGTTTTTTCCGGCCTTTTTCATATCTCTGACGATGTACGCGTTT--- 909
|..|.|||||.||.||.|||||.||.||.||.||||||| |||
BPUM_1186___d 863 GTTTATTTTTCCCTGCGTTTTTTATTTCACTCACGATGT-----TTTGCT 907
BSNT_02183___ 910 -----AATGTGCTGGGGGACGGATTGCAGGATGCGCTTGACCCTAAGCTG 954
||| .|.||.||.||.|||||.|||||||||||.||.|||.||
BPUM_1186___d 908 TTAACAAT---TTAGGTGATGGCTTGCAAGATGCGCTTGATCCGAAGATG 954
BSNT_02183___ 955 AGGAGGTAG- 963
|.||||| |
BPUM_1186___d 955 AAGAGGT-GA 963
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.