Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02264 and BPUM_1237
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:43
# Commandline: needle
# -asequence dna-align/BSNT_02264___sigI.1.24716.seq
# -bsequence dna-align/BPUM_1237___sigI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02264___sigI-BPUM_1237___sigI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02264___sigI-BPUM_1237___sigI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02264___sigI
# 2: BPUM_1237___sigI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 780
# Identity: 579/780 (74.2%)
# Similarity: 579/780 (74.2%)
# Gaps: 48/780 ( 6.2%)
# Score: 2116.5
#
#
#=======================================
BSNT_02264___ 1 GTGAAACCAGTGCTTAGCCTTTTGTTTAAATTGGGAAAAAAGAAGCAAAC 50
|||||||||.||||||||||||||||||||...|||||.||.||||||||
BPUM_1237___s 1 GTGAAACCATTGCTTAGCCTTTTGTTTAAAAAAGGAAAGAAAAAGCAAAC 50
BSNT_02264___ 51 ACTTGAAAAAGCTGTTGAG-----AGTATACAAAAAGGCAATAAAGATCT 95
|.| |.|||.||.| | |||||.|||.||||..|||..||.||
BPUM_1237___s 51 ATT----AGAGCAGTCG-GCTATCAGTATCCAACAAGGTGATACCGAGCT 95
BSNT_02264___ 96 GCAAAATGAATTAATACAGCAATATAAGCCATTTATCGCAAAGACGGTTT 145
||||||||.|||||||.|||||||.||.||||||.||||.||||||||||
BPUM_1237___s 96 GCAAAATGCATTAATAGAGCAATACAAACCATTTGTCGCTAAGACGGTTT 145
BSNT_02264___ 146 CATCCGTTTGTAAACGATATATAGATGAAAAAGACGATGAGTTCAGTATT 195
||||||||||||||||||||||||||||||||||.|||||.|||||.|||
BPUM_1237___s 146 CATCCGTTTGTAAACGATATATAGATGAAAAAGATGATGAATTCAGCATT 195
BSNT_02264___ 196 GGACTGATCGCGTTTAATGAAGCTATAGAAAAATATTCACCTGAAAAAGG 245
||..|.||.||.|||||||||||.|||||||||||.||..|.||||||||
BPUM_1237___s 196 GGCTTAATTGCCTTTAATGAAGCGATAGAAAAATACTCTGCCGAAAAAGG 245
BSNT_02264___ 246 AAATTCTCTGCTCGCATTTGCTGAGCTTATTATAAAAAGAAAAGTCATTG 295
|||.||.||.||.||.||.||.||..|.|||||.|||||||||||.||.|
BPUM_1237___s 246 AAACTCACTCCTTGCCTTCGCAGAATTAATTATTAAAAGAAAAGTGATCG 295
BSNT_02264___ 296 ATTACATTAGAAAAGAAGCCAGAA--GCGCACAAAATATAAATATCGATT 343
|.||.|||.||||||||||.|||| |||| |||....|.|| ||.||..
BPUM_1237___s 296 ACTATATTCGAAAAGAAGCGAGAAATGCGC-CAACGGTTCAA-ATGGACC 343
BSNT_02264___ 344 TACAGGAAGGAGACGATCAGGAGTCATCACAAAGCCTGATTGAAGCCGAG 393
|.||.|||.|.||..||...||||..||.||||||.||||||||||.|||
BPUM_1237___s 344 TGCAAGAAAGTGAAAATGGCGAGTATTCTCAAAGCATGATTGAAGCAGAG 393
BSNT_02264___ 394 CTTTCCATTGATGAATACCGCCGTCAGATTGAACAGGAGCAGAGGCGGGA 443
||.||.|...|||||||..|.|||...||||||||.||.||.||..|.||
BPUM_1237___s 394 CTGTCTACAAATGAATATAGACGTTTAATTGAACAAGAACATAGAAGAGA 443
BSNT_02264___ 444 GGAAATCCTCT----ATTTTCAAAAGCAGCTCAAGGAT--------TATG 481
.||||| | ||||| |||| ||.||| ||.|
BPUM_1237___s 444 AGAAAT----TGAACATTTT--AAAG------AAAGATTAAAAGTATACG 481
BSNT_02264___ 482 GTTTATCGTTTAAAGAACTGCTTGAAAATTCTCCAAAGCACACGGATGCA 531
||.|..|||||.||||.|||||||||.||||.||||||||..|.|||||.
BPUM_1237___s 482 GTCTCACGTTTCAAGAGCTGCTTGAACATTCACCAAAGCATGCAGATGCC 531
BSNT_02264___ 532 AGGCAAAACGCCATAAAGGTGGCAATGACGCTTGTTGAACATGAAGAATT 581
||||||||.|||||.||.||.||....||.||.||||||||.||.||
BPUM_1237___s 532 AGGCAAAATGCCATTAAAGTAGCTCACACACTCGTTGAACACGATGA--- 578
BSNT_02264___ 582 GGCCGCTATCC--TGTAT---ACAAAGAAGCAGCTTCCGGTCAAACAGCT 626
||..|.|.|| |.||| |.||| ||.||..|.||.|||||||||||
BPUM_1237___s 579 -GCTCCGAACCATTTTATTTCAGAAA-AAACAATTACCTGTCAAACAGCT 626
BSNT_02264___ 627 TGAACAGCTTGTCTCTGTAAGCCGAAAAACGATTGAGAGAAACAGAAAAT 676
||||.|.||.||....||.|||||.|||||||||||||||||.|||||||
BPUM_1237___s 627 TGAAAAACTAGTGGAAGTCAGCCGCAAAACGATTGAGAGAAATAGAAAAT 676
BSNT_02264___ 677 ATATTATTGCGATGTGTATTATCATTACGGGTGATTATATTTATTTAAAA 726
||||.|||||||||...||.||.||.||||||||||||.|.|||||.|||
BPUM_1237___s 677 ATATCATTGCGATGGCGATCATTATGACGGGTGATTATGTGTATTTGAAA 726
BSNT_02264___ 727 GATTATCTTAAAGGGGTGCTGCACTCATGA 756
|||||.||||||||||||||..|.||||||
BPUM_1237___s 727 GATTACCTTAAAGGGGTGCTTAATTCATGA 756
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