Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02329 and BPUM_1279
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:47
# Commandline: needle
# -asequence dna-align/BSNT_02329___ptsG.1.24716.seq
# -bsequence dna-align/BPUM_1279___ptsG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02329___ptsG-BPUM_1279___ptsG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02329___ptsG-BPUM_1279___ptsG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02329___ptsG
# 2: BPUM_1279___ptsG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2141
# Identity: 1613/2141 (75.3%)
# Similarity: 1613/2141 (75.3%)
# Gaps: 82/2141 ( 3.8%)
# Score: 5860.0
#
#
#=======================================
BSNT_02329___ 1 ATGTTTAAAGCATTATTCGGCGTTCTTCAAAAAATTGGGCGTGCGCTTAT 50
.||||||||.||.|.||.||.||..|.|||||||||||.||.||.|||||
BPUM_1279___p 1 GTGTTTAAATCACTTTTTGGTGTATTGCAAAAAATTGGACGAGCACTTAT 50
BSNT_02329___ 51 GCTTCCAGTTGCGATCCTTCCGGCTGCGGGGATTTTGCTTGCGATCGGGA 100
|||||||||||||||||||||.|||||.||.|||||.||.||..|.||||
BPUM_1279___p 51 GCTTCCAGTTGCGATCCTTCCTGCTGCTGGTATTTTACTAGCACTTGGGA 100
BSNT_02329___ 101 ATGCGATGCAAAATAAGGACATGATTCAGGT-CCTGCATTTCTTGAGCAA 149
||||||||||||||..|.|..|||||.|.|| .|| ||.||.||.|||||
BPUM_1279___p 101 ATGCGATGCAAAATCCGCAACTGATTGATGTAGCT-CAATTTTTAAGCAA 149
BSNT_02329___ 150 TG--ACAATGTTCAGCTTGTAGCAGGTGTGATGGAAAGCGCTGGGCAGAT 197
|| |||| ||||||||||.|||.||||.|||||||..||.|||.|.||
BPUM_1279___p 150 TGATACAA--TTCAGCTTGTTGCAAGTGTCATGGAAAATGCAGGGAACAT 197
BSNT_02329___ 198 TGTTTTCGATAACCTTCCGCTTCTT-TTCGCAGTAGGTGTAGCCATCGGG 246
|||.|||...||.||||||| |||| ||.||.|||||.||.||||||||.
BPUM_1279___p 198 TGTCTTCTCGAATCTTCCGC-TCTTATTTGCTGTAGGGGTTGCCATCGGT 246
BSNT_02329___ 247 CTTGCCAACGGTGATGGAGTTGCAGGGATTGCAGCAATTATCGGTTATCT 296
|||||.||.||.||.||.||.|||||||||||.|||||||||||||||||
BPUM_1279___p 247 CTTGCTAATGGAGACGGTGTGGCAGGGATTGCCGCAATTATCGGTTATCT 296
BSNT_02329___ 297 TGTAATGAATGTATCCATGAGTGCGGTTCTTCTTGCAAACGGAACCATTC 346
.||.|||||.|||.|.||||||||.||..|..|.||.||.|||.|.||||
BPUM_1279___p 297 AGTTATGAACGTAACAATGAGTGCCGTATTAATGGCCAATGGATCGATTC 346
BSNT_02329___ 347 CTTCGGATTC-----AGTTGAAAGAGCCAAGTTCTTTACGGAAAACCATC 391
|.||.||||| |.||| ||.||||||||||.|||||.|||||
BPUM_1279___p 347 CATCCGATTCCATCAAATTG-----GCTAAGTTCTTTAAGGAAAGCCATC 391
BSNT_02329___ 392 CTGCATATGTAAACATGCTTGGTATACCTACCCTGGCGACAGGGGTGTTC 441
|.||||||||.||.|||||.||.|||||.|||.||.|.||.||.||.|||
BPUM_1279___p 392 CAGCATATGTTAATATGCTCGGAATACCGACCTTGTCTACCGGCGTCTTC 441
BSNT_02329___ 442 GGCGGTATTATCGTCGGTGTGTTAGCTGCATTAT-TGTTTAACAGATTTT 490
|||||.|||||.|||||.||.||.||.|| |||| |||||||.|.|||||
BPUM_1279___p 442 GGCGGGATTATTGTCGGGGTATTGGCAGC-TTATATGTTTAATAAATTTT 490
BSNT_02329___ 491 ACACAATTGAACTGCCGCAATACCTTGGTTTCTTTGCGGGTAAACGTTTC 540
|.|.||||||.||.||.|||||.|||||.||||||||.||.||||||||.
BPUM_1279___p 491 ATAAAATTGAGCTCCCACAATATCTTGGCTTCTTTGCTGGAAAACGTTTT 540
BSNT_02329___ 541 GTTCCAATTGTTACGTCAATTTCTGCACTGATTCTGGGTCTTATTATGTT 590
||||||||.||.||.||.|||||.|||||.|||.|.||.|||.|.|||.|
BPUM_1279___p 541 GTTCCAATCGTAACATCTATTTCAGCACTTATTTTAGGGCTTTTGATGCT 590
BSNT_02329___ 591 AGTGATCTGGCCTCCGATCCAGCATGG--ATTGAATGCCTTTTCAACAGG 638
.||.||.|||||.||.||.|| |.|| |.||||..|.||.||||||||
BPUM_1279___p 591 CGTCATTTGGCCGCCAATTCA--AGGGGCACTGAACTCGTTCTCAACAGG 638
BSNT_02329___ 639 ATTAGTGGAAGCGAATCCAACC-CTTGCTGCATTTATCTTCGGGGTGATT 687
|.|..|.|.||||||| .|.|| ||||||||.|||.|.|||||.||.|||
BPUM_1279___p 639 ACTGCTTGCAGCGAAT-GAGCCGCTTGCTGCCTTTGTATTCGGTGTCATT 687
BSNT_02329___ 688 GAACGTTCGCTTATCCCATTCGGATTGCACCACATTTTCTATTCGCCGTT 737
|||||.||..|.||.||.||.||.|||||.|||||.|||||..|.||.||
BPUM_1279___p 688 GAACGCTCATTAATTCCGTTTGGTTTGCATCACATATTCTACGCACCATT 737
BSNT_02329___ 738 CTGGTATGAATTCTTCAGCTATAAGAGTGCAGCAGGAGAAATCATCCGCG 787
.||||||||.|||||.|||||||||||...|.|||||||.||.|||||.|
BPUM_1279___p 738 TTGGTATGAGTTCTTTAGCTATAAGAGCTTATCAGGAGATATTATCCGTG 787
BSNT_02329___ 788 GGGATCAGCGTATCTTTATGGCGCAGATTAAAGACGGCGTACAGTTAACG 837
|.||||||||||||||.|||||.|||||.|||||.||.||.|||.|.||.
BPUM_1279___p 788 GTGATCAGCGTATCTTCATGGCACAGATCAAAGATGGTGTTCAGCTCACA 837
BSNT_02329___ 838 GCAGGTACGTTTATGACAGGTAAATATCCATTTATGATGTTCGGTCTGCC 887
||.|||||.||.||||||||.||||||||.||.||||||||.||||||||
BPUM_1279___p 838 GCTGGTACATTCATGACAGGAAAATATCCGTTCATGATGTTTGGTCTGCC 887
BSNT_02329___ 888 TGCTGCGGCGCTTGCCATTTATCATGAAGCAAAACCGCAAAACAAAAAAC 937
.||.||.||.|||||.|||||.||||||||||||||..|.||.|||||.|
BPUM_1279___p 888 AGCAGCAGCACTTGCGATTTACCATGAAGCAAAACCAAAGAATAAAAAGC 937
BSNT_02329___ 938 TCGTTGCAGGTATTATGGGTTCAGCGGCCTTGACATCCTTCTTAACGGGG 987
|.||.||.||.||||||||.|||||.|||.||||.||.|||.||||.|||
BPUM_1279___p 938 TTGTCGCTGGAATTATGGGATCAGCAGCCCTGACTTCTTTCCTAACAGGG 987
BSNT_02329___ 988 ATCACAGAGCCATTGGAATTTTCTTTCTTATTCGTTGCTCCAGTCCTGTT 1037
||.||.||.||..|.|||||.||.|||||.||.|||||.|||||..|.||
BPUM_1279___p 988 ATTACTGAACCGCTTGAATTCTCATTCTTGTTTGTTGCACCAGTGTTATT 1037
BSNT_02329___ 1038 TGCGATTCACTGTTTGTTTGCGGGACTTTCATTCATGGTCATGCAGCTGT 1087
|||.||.||||||.|.|||||.|||.|.||.||.|||.|.|||.|..|..
BPUM_1279___p 1038 TGCAATCCACTGTGTATTTGCTGGATTATCCTTTATGATAATGGATATTC 1087
BSNT_02329___ 1088 TGAATGTTAAGATTGGTATGACATTCTCCGGCGGTTTAATTGACTACTTC 1137
|.||.||.||.||.||||||||.|||||.||.||.||||||||||.||||
BPUM_1279___p 1088 TAAACGTGAAAATCGGTATGACCTTCTCAGGAGGGTTAATTGACTTCTTC 1137
BSNT_02329___ 1138 CTATTCGGTATTTTACCGAACCGGACGGCATGGTGGCTTGTCATCCCTGT 1187
.|||||||.||.||.||.|||.|.||.||.|||||||||||.||.||.||
BPUM_1279___p 1138 TTATTCGGAATCTTGCCAAACAGAACCGCTTGGTGGCTTGTGATTCCAGT 1187
BSNT_02329___ 1188 CGG-CTTAGGGT--TAGCGGTCATTTACTACTTCGGATTCCGATTTGCCA 1234
.|| ||| || |.||.|..|||||.|||||||||||..|||||||.|
BPUM_1279___p 1188 TGGTCTT---GTACTTGCTGCTATTTATTACTTCGGATTTAGATTTGCTA 1234
BSNT_02329___ 1235 TCCGCAAATTTAATCTGAAAACACCTGGACG---CGAGGATGCTGCGGAA 1281
|.||.|||||||||||||||||.||.||.|| .||.||.||||..||.
BPUM_1279___p 1235 TTCGTAAATTTAATCTGAAAACGCCAGGCCGTGAAGACGAAGCTGATGAC 1284
BSNT_02329___ 1282 GAAAC-AGCAGCACCTGGGAAAACAGGTGAAGCAGGGG--AT--CTT-CC 1325
||..| ||.|| ||..||..| |||| |.||| || ||| ||
BPUM_1279___p 1285 GATGCAAGTAG----TGCTAAGTC---TGAA--AAGGGTAATGACTTACC 1325
BSNT_02329___ 1326 TTATGAGATTCTGCAGGCAATGGGTGACCAGGAAAACATCAAACACCTTG 1375
||||||.|||||..|.||||||||||||||.||||||||.||||||||||
BPUM_1279___p 1326 TTATGAAATTCTTGAAGCAATGGGTGACCAAGAAAACATTAAACACCTTG 1375
BSNT_02329___ 1376 ATGCTTGTATCACTCGTCTGCGTGTGACTGTAAACGATCAGAAAAAGGTT 1425
||||||||||.||.|||.|.|||||.|||||.||.||||||||.||.||.
BPUM_1279___p 1376 ATGCTTGTATTACCCGTTTACGTGTTACTGTGAATGATCAGAAGAAAGTG 1425
BSNT_02329___ 1426 GATAAAGACCGTCTGAAACAGCTTGGCGCTTCCGGAGTGCTGGAAGTCGG 1475
||||||||||||.|||||.|.|||||.|||||.|||||.||.|||||.||
BPUM_1279___p 1426 GATAAAGACCGTTTGAAAAAACTTGGTGCTTCAGGAGTTCTTGAAGTAGG 1475
BSNT_02329___ 1476 CAACAACATTCAGGCTATTTTCGGACCGCGTTCTGACGGGTTAAAAACAC 1525
.||||||||.|||||.||.||||||||.||.|||||....||||||||||
BPUM_1279___p 1476 AAACAACATCCAGGCCATCTTCGGACCACGCTCTGATAATTTAAAAACAC 1525
BSNT_02329___ 1526 AAATGCAAGACATTATTGCGGGACGCAAGCCTAGACCTGAACCGAAA--- 1572
|||||||.|||||.|||||.||.||||.||||.|.|| |.|||||
BPUM_1279___p 1526 AAATGCAGGACATCATTGCAGGCCGCACGCCTCGTCC---AGCGAAAGAC 1572
BSNT_02329___ 1573 ACATCTGCTCAAGAGGAAGTAGGACAGCAGGTTGAGGAAGTGATTGCAGA 1622
.|.|||||..||||.|||||..|.||||||||.||.|||||.||||||.|
BPUM_1279___p 1573 CCTTCTGCAAAAGAAGAAGTCAGCCAGCAGGTCGAAGAAGTCATTGCAAA 1622
BSNT_02329___ 1623 ACCGCTGCAAAATGA--AATCGGAGAGGAAGTTTTCGTTTCTCCGATTAC 1670
||||||.|||||||| || ||.||.|||.|.||.|.|||.||.|||||
BPUM_1279___p 1623 ACCGCTTCAAAATGAGCAA--GGTGAAGAAATCTTTGCTTCACCAATTAC 1670
BSNT_02329___ 1671 CGGGGAAATTCACCCGATTACGGATGTTCCTGACCAAGTCTTCTCAGGAA 1720
.|||||..||||.||||||||.|||||.||.||.|||||.||||||||.|
BPUM_1279___p 1671 AGGGGAGCTTCATCCGATTACAGATGTACCAGATCAAGTATTCTCAGGGA 1720
BSNT_02329___ 1721 AAATGATGGGTGACGGTTTTGCGATTCTCCCTTCTGAAGGAATTGTCGTA 1770
|||||||||||||||||||.||.||..|.||..|.||.||||..||.||.
BPUM_1279___p 1721 AAATGATGGGTGACGGTTTCGCCATCTTACCAACAGATGGAACGGTGGTT 1770
BSNT_02329___ 1771 TCACCGGTTCGCGGAAAAATTCTAAATGTGTTCCCGACGAAACATGCGAT 1820
||||||||....||.||.||..|||||||.|||||.||||||||.||.||
BPUM_1279___p 1771 TCACCGGTAAAAGGGAAGATCTTAAATGTATTCCCAACGAAACACGCAAT 1820
BSNT_02329___ 1821 CGGCCTGCAATCCGACGGCGGAAGAGAAATTTTAATCCACTTTGGTATTG 1870
.|||||||||||.||.||.|||...||||||||.||||||||.|||||||
BPUM_1279___p 1821 TGGCCTGCAATCTGATGGTGGACTTGAAATTTTGATCCACTTCGGTATTG 1870
BSNT_02329___ 1871 ATACCGTCAGCCTGAAGGGCGAAGGATTT-ACGTCTTTCGTATCAGAAGG 1919
||||.||||||||.||.||.|||||.||| |.| |.||.|||..|||.||
BPUM_1279___p 1871 ATACGGTCAGCCTCAAAGGAGAAGGGTTTGAAG-CATTTGTACAAGAGGG 1919
BSNT_02329___ 1920 AGACCGCGTTGAGCCTGGACAAAAACTTCTT-GAAGTTGATCTGGATAAA 1968
|||.|..||.||....||.||||||| |||| |..||||||.|.||||||
BPUM_1279___p 1920 AGATCAAGTAGAAATCGGTCAAAAAC-TCTTAGTGGTTGATATTGATAAA 1968
BSNT_02329___ 1969 GTCAA-ACCGAATGTACCATCTCTCATGACACCGATTGTATTTACAAACC 2017
.|.|| .|.||| |||||||||.|.||||||||.|||||||||||.|||.
BPUM_1279___p 1969 ATTAAGTCTGAA-GTACCATCTTTAATGACACCAATTGTATTTACCAACT 2017
BSNT_02329___ 2018 TTGCTGAAGGAGAA-------ACAGTCAGTATTAAAGCAAGCGGTTCAGT 2060
|...|||||||.|| ||..||| ||| ||.||||..|.|
BPUM_1279___p 2018 TAAGTGAAGGACAATTTATTGACCTTCA-----AAA--AACCGGTGAAAT 2060
BSNT_02329___ 2061 CAACAG-AGAACAAGAAGATATTGTGAAGATTGAAAAATAA 2100
||| || .|..||||||.|.||..||||.|||..|||||||
BPUM_1279___p 2061 CAA-AGCTGGTCAAGAAAACATCATGAAAATTTCAAAATAA 2100
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