Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02355 and BPUM_1304
See
Amino acid alignment /
Visit
BSNT_02355 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:50
# Commandline: needle
# -asequence dna-align/BSNT_02355___ykuI.1.24716.seq
# -bsequence dna-align/BPUM_1304___ykuI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02355___ykuI-BPUM_1304___ykuI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02355___ykuI-BPUM_1304___ykuI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02355___ykuI
# 2: BPUM_1304___ykuI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1267
# Identity: 903/1267 (71.3%)
# Similarity: 903/1267 (71.3%)
# Gaps: 89/1267 ( 7.0%)
# Score: 3038.0
#
#
#=======================================
BSNT_02355___ 1 ATGTTGGATCCACTTGATATTTTAACGAACATTGATGATGTCCTTCCATA 50
|||.|.||||||.|.||||||||||||||.|||||.|||||..|.||..|
BPUM_1304___y 1 ATGGTCGATCCATTGGATATTTTAACGAATATTGAAGATGTTTTCCCGCA 50
BSNT_02355___ 51 TTACCAGGCGATTTTTAGTGCCGAGGAGCAGAAGGTTGTCGGATATGAGG 100
.||.||.|||||.||.|||||.||.|||||.||.||..|.||.||||||.
BPUM_1304___y 51 CTATCAAGCGATATTCAGTGCGGAAGAGCAAAAAGTGATAGGCTATGAGA 100
BSNT_02355___ 101 TGCTTGGACGAATTTTGGCA----GATTCAGAAATCCA--AAGTCTCGGG 144
|..|.|||.|||| |.| ||.||.|||| || .||.||.||.
BPUM_1304___y 101 TTTTAGGAAGAAT----GAAGCTCGAGTCTGAAA--CAGTTAGCCTAGGC 144
BSNT_02355___ 145 CCCTTCTTTTTAGATGCGGGGATACCCGAAGAATATAAACTAGAGGTTGA 194
.||||||||...|||.|....||.||.||.|||||||||.|.||.||.||
BPUM_1304___y 145 TCCTTCTTTACGGATTCATCTATTCCTGACGAATATAAAGTGGAAGTAGA 194
BSNT_02355___ 195 TAACAGAATTATC---CGCCAGGCTCTTGACCGCTTTTT------AGAGG 235
|.|.| ||.|| | || ||.||.||.||.| |||| |||
BPUM_1304___y 195 TCATA-AAGTA-CTGACG-CAAGCACTCGATC---TTTTCACAACAGA-- 236
BSNT_02355___ 236 CGGATTCTGATCTGCTGATTTTTATGAATCAGGATGCCAATCTGCTGATG 285
.|||..||||.||||.||||||||.|||||.|||||.|||.|..|||||
BPUM_1304___y 237 -AGATGATGATTTGCTCATTTTTATTAATCATGATGCAAATATCTTGATG 285
BSNT_02355___ 286 CTGGATCATGGTGAAAGCTTTCTGGAGCTTCTGAAAGAATATGAAGCGAA 335
||.||||||||||||||||||.||||.|||.||||.|||||||||||.|.
BPUM_1304___y 286 CTTGATCATGGTGAAAGCTTTTTGGAACTTTTGAAGGAATATGAAGCAAG 335
BSNT_02355___ 336 GGGAATCGAACTCCACCGTTTTGTTCTTGAAATTACAGAGCACAATTTTG 385
|||.||..|.||..|.||.||||||.|.|||.||||||||||.|..|||.
BPUM_1304___y 336 GGGTATTCAGCTGAATCGATTTGTTATCGAATTTACAGAGCATACGTTTA 385
BSNT_02355___ 386 AAGGGGATATTGAGCAGCTCTACCATATGCTTGCATACTATCGTACATAC 435
..||.||||||||.|||||.|||||||.|.|..|.||.|.|||||||||.
BPUM_1304___y 386 GCGGCGATATTGAACAGCTTTACCATACGTTAACGTATTTTCGTACATAT 435
BSNT_02355___ 436 GGAATTAAAATCGCAGTTGACAACATCGGAAAAGAAAGCAGCAA-CTTGG 484
||.|||||||||||..|....||.|||||||||||||||||||| ||| |
BPUM_1304___y 436 GGTATTAAAATCGCCATCTCGAATATCGGAAAAGAAAGCAGCAATCTT-G 484
BSNT_02355___ 485 ACAGAATCGCGCTGCTCTCACCAGATCTGTTAAAAATCGATTTGCAGGCG 534
|..|.||.||..||||||||||.|||||.||||||||.|||||.|| ||
BPUM_1304___y 485 ATCGGATTGCTTTGCTCTCACCCGATCTATTAAAAATAGATTTACA--CG 532
BSNT_02355___ 535 C-TGAAAGTGTCACAG---CCGTCACCGTCATATGAGCATGTGCTGTACA 580
| |.||| |.||..| ||.||.||.||.|||||..||||..||||||
BPUM_1304___y 533 CATTAAA--GGCATCGGCTCCTTCGCCTTCCTATGAATATGTTTTGTACA 580
BSNT_02355___ 581 GCATATCTTTATTAGCAAGAAAAATCGGTGCGGCGCTATTGTATGAAGAC 630
||||.||.||..|.||.||||||||.||.||.||..||.|.|||||||||
BPUM_1304___y 581 GCATTTCATTGCTTGCGAGAAAAATAGGGGCAGCTTTAATTTATGAAGAC 630
BSNT_02355___ 631 ATTGAGGCGAACTTCCAGCTACAGTACGCCTGGAGAAACGGAGGCCGTTA 680
|||||.||.||.||.|||||.|||||.||.||||||||.||.||..|.||
BPUM_1304___y 631 ATTGAAGCAAATTTTCAGCTGCAGTATGCTTGGAGAAATGGCGGAAGATA 680
BSNT_02355___ 681 TTTTCAGGG---CTATTACTT--GGTGTCTCCATCTGAAACGTTTCTAGA 725
.|||||.|| |||| ||| .|.|.||.|..|.||| ||..|.||
BPUM_1304___y 681 CTTTCAAGGGTTCTAT--CTTCATGAGCCTGCGGCGGAA---TTAATCGA 725
BSNT_02355___ 726 GAGAGATGTATTAAAAC--AAAGA----CTTAAAACTGAATTTCACCAAT 769
..|..|| |||| ||||| ||.|.|...|||||.||.||||
BPUM_1304___y 726 TCGCAAT------AAACGAAAAGATCAGCTGAGAGAAGAATTCCAGCAAT 769
BSNT_02355___ 770 TTATCACACATGAGAAAAAGAAACTGGAGACCGTCTATGAGCACTCTG-A 818
||||..|.|||||||||||||||||..|.||.|||||.||.||.|||| |
BPUM_1304___y 770 TTATTGCCCATGAGAAAAAGAAACTTCAAACGGTCTACGAACATTCTGAA 819
BSNT_02355___ 819 ACAGTTTTACAAACGAGTGCATCAGGCTGTGACCTCTTTGAGAAAAAACA 868
||| |||||.||||||.|.||.||.|||||.||..|.|| |.|||||.||
BPUM_1304___y 820 ACA-TTTTATAAACGAATTCACCAAGCTGTCACGACCTT-AAAAAAATCA 867
BSNT_02355___ 869 ATCTGTCTTCTGATGATGACTTTATTAAAAAGCTGGCGGAAGAGCTGACA 918
..|.| |.|..|||||||..|||||.||||||||||...|||..|.||.
BPUM_1304___y 868 TGCAG--TACAAATGATGAACTTATTCAAAAGCTGGCATTAGAATTAACG 915
BSNT_02355___ 919 GATTGCAGCTTCAGGATTTACATGTGTGATGAAGAAGGCGATCAGCTGAC 968
|||||||||||..|||||||.||||||.|.|||||||||..|||..|.||
BPUM_1304___y 916 GATTGCAGCTTTCGGATTTATATGTGTAACGAAGAAGGCTTTCAAATCAC 965
BSNT_02355___ 969 GGGAAATGTGTTTAAGCAAGATGGAGAATGGATTTATCAGCCGGAATATG 1018
.||||||||||||||..||||...|||||||.|.|.||||||.||||||.
BPUM_1304___y 966 TGGAAATGTGTTTAAAAAAGAAAAAGAATGGTTGTTTCAGCCTGAATATA 1015
BSNT_02355___ 1019 CGGAAAAGAACTGGAGCTGGCGCCCTTATTTTCTGGAGAACATT------ 1062
..||.||.||||||||||||||.||||||||.||.|..||.|||
BPUM_1304___y 1016 TCGAGAAAAACTGGAGCTGGCGTCCTTATTTCCTAGCAAATATTCTCCAA 1065
BSNT_02355___ 1063 ATGAGAATGAGAAATCTCAGAAAAGGTTTTTTCAGTGATCTGTACAGTGA 1112
||||||||||| |.|.|||||.||||||||||||.|.|||||.||
BPUM_1304___y 1066 ATGAGAATGAG------CGGGAAAGGATTTTTCAGTGATATTTACAGCGA 1109
BSNT_02355___ 1113 TTTGGAAACAGGTGAAATGATCAGAACGTTTTCATATCC----GATGGAT 1158
|||.|||||.|||||.|.|||..|.||||||||.||.|| ||.|||
BPUM_1304___y 1110 TTTAGAAACTGGTGAGAGGATACGTACGTTTTCTTACCCGTTAGAGGGA- 1158
BSNT_02355___ 1159 GATCAGATGTATTTATTTATAGA-CTTGCCTTATTCTTATTTATATGAGC 1207
||| ||||||||.|||||||| ||| ||.|||.|.|||||||||||||
BPUM_1304___y 1159 GAT---ATGTATTTGTTTATAGATCTT-CCGTATGCCTATTTATATGAGC 1204
BSNT_02355___ 1208 AGGACGGACTGATTTAA 1224
|.||.|||.|.||||||
BPUM_1304___y 1205 AAGATGGATTAATTTAA 1221
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.