Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02359 and BPUM_1308
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:50
# Commandline: needle
# -asequence dna-align/BSNT_02359___ykzF.1.24716.seq
# -bsequence dna-align/BPUM_1308___ykzF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02359___ykzF-BPUM_1308___ykzF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02359___ykzF-BPUM_1308___ykzF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02359___ykzF
# 2: BPUM_1308___ykzF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 199
# Identity: 134/199 (67.3%)
# Similarity: 134/199 (67.3%)
# Gaps: 14/199 ( 7.0%)
# Score: 392.5
#
#
#=======================================
BSNT_02359___ 1 ATGAGTCTTATCGGTGAACGATTTACAGAAGAAGAACAAAAACTTCTGCT 50
|||||..|.||||...|.||.||||..||||||||..||||.||..|..|
BPUM_1308___y 1 ATGAGCGTCATCGAAAATCGTTTTAATGAAGAAGAGAAAAAGCTATTATT 50
BSNT_02359___ 51 GAA--TATCCTGATCAACCATGAGTATGCCATCGAGCTATTAAGCAGTGA 98
.|| ||| ||.|.||.||.||.|||||..||||..||.||||||||||
BPUM_1308___y 51 AAACGTAT--TGCTGAATCAGGAATATGCTGTCGAATTACTAAGCAGTGA 98
BSNT_02359___ 99 GATCAACGATATAGAGACAGGGACCAAAAA----CGTTGACGGAACCACC 144
||||||.|||||||| |...|||.|||||| ||.|||| |..||.
BPUM_1308___y 99 GATCAATGATATAGA-ATGTGGAACAAAAAATGTCGATGAC---AATACG 144
BSNT_02359___ 145 TACAAAAAACTTG-TAACGCTATACGACCGATTTCGATTTGAAAATTAA 192
||.||..|| ||| |.||..|.||.|||.||.|..|.|||||.||||||
BPUM_1308___y 145 TATAAGCAA-TTGATCACATTGTATGACAGAGTAAGGTTTGAGAATTAA 192
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