Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02365 and BPUM_1315

See Amino acid alignment / Visit BSNT_02365 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:51
# Commandline: needle
#    -asequence dna-align/BSNT_02365___ykuQ.1.24716.seq
#    -bsequence dna-align/BPUM_1315___dapD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02365___ykuQ-BPUM_1315___dapD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02365___ykuQ-BPUM_1315___dapD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02365___ykuQ
# 2: BPUM_1315___dapD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 715
# Identity:     584/715 (81.7%)
# Similarity:   584/715 (81.7%)
# Gaps:           8/715 ( 1.1%)
# Score: 2376.5
# 
#
#=======================================

BSNT_02365___      1 ATGAAAATGATGGACGCAAATGAAATTATTTCATTTATTCAAAATAGTAC     50
                     ||||||...||||||||.||||||||||||||||||||||||||||||||
BPUM_1315___d      1 ATGAAACAAATGGACGCTAATGAAATTATTTCATTTATTCAAAATAGTAC     50

BSNT_02365___     51 AAAATCAACACCTGTAAAGGTTTACGTGAAAGGTGAGCTGGAAGGAATCA    100
                     |||||||||||||||.||.||.|||.|.||||||||..|.|||||.||..
BPUM_1315___d     51 AAAATCAACACCTGTCAAAGTCTACATTAAAGGTGATTTAGAAGGTATTG    100

BSNT_02365___    101 ATTTCGGCGAATCTGCGAAAGCTTTTATCAACGGAAACACTGGTGTCGTT    150
                     |.||.||.|||...||.|||.|.||.||||..|||||||||||.||.|||
BPUM_1315___d    101 AGTTTGGTGAACAGGCAAAAACGTTCATCACAGGAAACACTGGAGTTGTT    150

BSNT_02365___    151 TTCGGTGAGTGGAGCGAAATCCAAACAGCAATCGAAGAAA--ACCAAAG-    197
                     |||||||||||||||||.||.|||..|||..|   |||||  |.||||| 
BPUM_1315___d    151 TTCGGTGAGTGGAGCGACATTCAAGAAGCGCT---AGAAACGAACAAAGA    197

BSNT_02365___    198 CAAAATCGAAGACTATGTGGTTGAAAATGACCGCCGCAATTCTGCGATCC    247
                     ||||||.|||||...|||.||.||||||||.||||||||.|||||.||||
BPUM_1315___d    198 CAAAATTGAAGATGTTGTTGTGGAAAATGATCGCCGCAACTCTGCCATCC    247

BSNT_02365___    248 CAATGCTTGATCTTAAA-AACATCAAAGCGCGTATCGAGCCGGGCGCGAT    296
                     |||||.|.||| ||||| |||||.|||||.|||||.|||||.||.|||||
BPUM_1315___d    248 CAATGTTAGAT-TTAAAGAACATTAAAGCACGTATTGAGCCAGGTGCGAT    296

BSNT_02365___    297 CATCCGCGACCAAGTTGAAATCGGTGATAACGCAGTCATCATGATGGGTG    346
                     |||.||.|||||||||||||||||||||||.|||||||||||||||||.|
BPUM_1315___d    297 CATTCGTGACCAAGTTGAAATCGGTGATAATGCAGTCATCATGATGGGGG    346

BSNT_02365___    347 CTTCTATTAATATCGGTTCAGTCATCGGCGAAGGCACAATGATTGATATG    396
                     |||||||||||||||||||.||.|||||||||||.|||||||||||.|||
BPUM_1315___d    347 CTTCTATTAATATCGGTTCTGTGATCGGCGAAGGTACAATGATTGACATG    396

BSNT_02365___    397 AACGTTGTGCTTGGCGGACGAGCTACTGTTGGAAAAAACTGCCATATCGG    446
                     |||||.|||||||||||.||.||.||.||.||.||.|||||.||||||||
BPUM_1315___d    397 AACGTAGTGCTTGGCGGCCGTGCGACAGTAGGTAAGAACTGTCATATCGG    446

BSNT_02365___    447 CGCGGGTTCTGTACTTGCGGGCGTTATTGAGCCGCCATCCGCTAAACCGG    496
                     .||.||.|||||.|||||.||.||.||||||||.||.||.|||||.||.|
BPUM_1315___d    447 TGCTGGATCTGTTCTTGCAGGTGTCATTGAGCCACCGTCTGCTAAGCCAG    496

BSNT_02365___    497 TTGTGATTGAAGACGACGTCGTAATCGGCGCAAATGCTGTTGTGCTTGAA    546
                     ||||..|.|||||.||.||.||.|||||.||.|||||||||||.||.|||
BPUM_1315___d    497 TTGTCGTAGAAGATGATGTTGTCATCGGTGCGAATGCTGTTGTTCTAGAA    546

BSNT_02365___    547 GGCGTAACAGTAGGTAAAGGAGCTGTTGTTGCTGCGGGCGCGATCGTGGT    596
                     ||.||.|||.|.||||||||.||.||.||.|||||.||.||||||||.||
BPUM_1315___d    547 GGTGTGACAATTGGTAAAGGTGCAGTCGTAGCTGCAGGTGCGATCGTTGT    596

BSNT_02365___    597 AAACGACGTTGAGCCATACACTGTCGTTGCAGGCACACCAGCTAAAAAAA    646
                     .|||||.||.|||||.|||||.||.||.|||||.|||||.||.||.||||
BPUM_1315___d    597 GAACGATGTAGAGCCTTACACAGTTGTAGCAGGTACACCTGCAAAGAAAA    646

BSNT_02365___    647 TCAAAGACATTGATGAAAAAACAAAAGGCAAAACTGAAATCAAGCAGGAA    696
                     ||||||||||||||||||||||||||||.|||||.|||||.||.||.|||
BPUM_1315___d    647 TCAAAGACATTGATGAAAAAACAAAAGGTAAAACAGAAATTAAACAAGAA    696

BSNT_02365___    697 TTACGCCAGCTGTAA    711
                     .|.||.|||||.|||
BPUM_1315___d    697 CTGCGTCAGCTTTAA    711


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