Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02412 and BPUM_1343

See Amino acid alignment / Visit BSNT_02412 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:53
# Commandline: needle
#    -asequence dna-align/BSNT_02412___mreBH.1.24716.seq
#    -bsequence dna-align/BPUM_1343___mreBH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02412___mreBH-BPUM_1343___mreBH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02412___mreBH-BPUM_1343___mreBH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02412___mreBH
# 2: BPUM_1343___mreBH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1025
# Identity:     778/1025 (75.9%)
# Similarity:   778/1025 (75.9%)
# Gaps:          22/1025 ( 2.1%)
# Score: 2909.0
# 
#
#=======================================

BSNT_02412___      1 TTGGGTGAAAACATGTTTCAATCAA--CTGAAATCGGGATTGACTTAGGA     48
                                 |||||||||  ||  |.|||||.||.|||||.||||||
BPUM_1343___m      1 ------------ATGTTTCAA--AATGCCGAAATTGGAATTGATTTAGGA     36

BSNT_02412___     49 ACAGCTAATATACTTGTTTACAGCAAAAATAAAGGGATTATCCTAAATGA     98
                     ||||||||.|||.|.|||||.||.||||||||.||.|||||..|||||||
BPUM_1343___m     37 ACAGCTAACATATTGGTTTATAGTAAAAATAAGGGAATTATTTTAAATGA     86

BSNT_02412___     99 ACCATCTGTTGTCGCAGTGGATAC-GACGACAAAAGCAGTGCTTGCAATC    147
                     |||.||.||.||.|||||.||||| || .||||||.|.||.|||||..||
BPUM_1343___m     87 ACCGTCCGTCGTGGCAGTCGATACAGA-AACAAAAACTGTACTTGCCGTC    135

BSNT_02412___    148 GGAGCTGATGCGAAAAACATGATCGGTAAAACACCGGGAAAAATTGTCGC    197
                     |||.|.||.||.|||.|.|||||.||.|||||.||.||.||||||||.||
BPUM_1343___m    136 GGAACAGAAGCAAAAGAAATGATTGGGAAAACTCCTGGGAAAATTGTGGC    185

BSNT_02412___    198 TGTCAGACCGATGAAAGATGGCGTGATCGCAGACTATGATATGACAACTG    247
                     ..||.|.||.||||||||.||.||.|||||.||.||||||||||||||.|
BPUM_1343___m    186 GATCCGTCCAATGAAAGACGGTGTCATCGCTGATTATGATATGACAACAG    235

BSNT_02412___    248 ACCTGCTAAAGCACATTATGAAAAAAGCCGCAAAAAGCATCGGCATGTCG    297
                     |..|.||.||.||.||.|||||||||||.|.|||||..|||||..|..|.
BPUM_1343___m    236 ATTTACTCAAACAAATCATGAAAAAAGCAGGAAAAAATATCGGGTTTACT    285

BSNT_02412___    298 TTCAGAAAACCGAAC-GTAGTCGTTTGCACACCATCAGGCTCAACAGCAG    346
                     ||||||||||| ||| ||.|||||.||.|||||.||.||.||||||||.|
BPUM_1343___m    286 TTCAGAAAACC-AACGGTCGTCGTCTGTACACCTTCTGGTTCAACAGCTG    334

BSNT_02412___    347 TAGAACGCCGCGCCATCAGTGATGCGGTGAAAAATTGCGGCGCGAAAAAC    396
                     |.||.||||||||||||||||||||.||||||||.||.||.||.||..||
BPUM_1343___m    335 TTGAGCGCCGCGCCATCAGTGATGCTGTGAAAAACTGTGGAGCAAAGCAC    384

BSNT_02412___    397 GTTCATTTAATCGAAGAGCCAGTTGCAGCCGCCATCGGAGCGGATTTACC    446
                     ||.||||||||||||||.||.||||||||.||.|||||.||.|||.|.||
BPUM_1343___m    385 GTGCATTTAATCGAAGAACCTGTTGCAGCGGCAATCGGCGCTGATCTGCC    434

BSNT_02412___    447 GGTTGATGAGCCGGTTGCCAATGTGGTAGTAGATATCGGCGGAGGGACGA    496
                     .||.||||||||.|||||.||.||.|||||.|||||.||||||||.||.|
BPUM_1343___m    435 AGTAGATGAGCCTGTTGCAAACGTCGTAGTCGATATTGGCGGAGGAACAA    484

BSNT_02412___    497 CAGAGGTCGCTATTATTTCCTTCGGTGGCGTTGTTTCCTGCCATTCTATC    546
                     ||||.||.||.||.|||||.||.||.|||||.||.||.||.|||||.||.
BPUM_1343___m    485 CAGAAGTTGCCATCATTTCGTTTGGCGGCGTGGTCTCTTGTCATTCCATT    534

BSNT_02412___    547 AGGATCGGCGGAGACCAGCTTGATGAGGATATCGTTTCTTTCGTCCGTAA    596
                     .|.||.||||||||.|||||||||||.||||||.||.|.||.||.||.||
BPUM_1343___m    535 CGAATTGGCGGAGATCAGCTTGATGAAGATATCATTACGTTTGTGCGAAA    584

BSNT_02412___    597 AAAATACAATTTGCTGATCGGCGAACGCACAGCTGAGCAGGTAAAAATGG    646
                     .|||||.||..|..|.||||||||.||.||||||||.|||||.||.||||
BPUM_1343___m    585 GAAATATAACCTATTAATCGGCGAGCGGACAGCTGAACAGGTTAAGATGG    634

BSNT_02412___    647 AAATTGGCCATGCTCTGATTGAACATATACCAGAGGCAATGGAAATTCGG    696
                     |||||||..|||.|||.|||||.|||...||||||.||.|.|||.|.||.
BPUM_1343___m    635 AAATTGGTTATGGTCTTATTGAGCATGAGCCAGAGTCATTAGAAGTACGT    684

BSNT_02412___    697 GGACGTGACCTCGTGACAGGTCTTCCAAAAACCATTATGCTTCAATCCAA    746
                     ||||||||.||.||.|||||||||||||||||.||.|..|||.||||..|
BPUM_1343___m    685 GGACGTGATCTAGTAACAGGTCTTCCAAAAACGATCACACTTGAATCTCA    734

BSNT_02412___    747 CGAAATTCAAGATGCAATGCGTGAATCCCTCCTGCATATTCTTGAAGCCA    796
                     .||||||||||.|||.|||||.||.||.|||||.||||||.|.||.||.|
BPUM_1343___m    735 TGAAATTCAAGGTGCTATGCGAGAGTCACTCCTTCATATTTTAGAGGCGA    784

BSNT_02412___    797 TCAGAGCGACACTTGAGGACTGTCCGCCTGAATTGAGCGGAGATATTGTT    846
                     |..|.||.|||.|.||||||.|.||.||.||..|.||.||.||.||.||.
BPUM_1343___m    785 TTCGCGCCACATTAGAGGACAGCCCCCCGGAGCTTAGTGGTGACATCGTA    834

BSNT_02412___    847 GATCGCGGCGTTATTTTAACAGGCGGCGGCGCGCTCCTTAATGGAATTAA    896
                     ||.||||||||.||.|||||.|||||.|||||..|..|.||.||||||.|
BPUM_1343___m    835 GACCGCGGCGTGATCTTAACTGGCGGTGGCGCTTTGTTAAACGGAATTCA    884

BSNT_02412___    897 AGAATGGCTCACAGAAGAGATTGTCGTGCCTGTACACGTGGC-GCAAAAC    945
                     ||||||||||.||.|.|||||||||||.||.||.||..|.|| || |||.
BPUM_1343___m    885 AGAATGGCTCTCACAGGAGATTGTCGTTCCAGTTCATATTGCTGC-AAAT    933

BSNT_02412___    946 CCGCTTGAATCTGTAGCAATCGGCACAGGCCGTTCTTTAGAAGTGATTGA    995
                     ||.|||||||||||.||||||||.|||||.|||||..|||||||.|||.|
BPUM_1343___m    934 CCACTTGAATCTGTTGCAATCGGAACAGGTCGTTCACTAGAAGTCATTCA    983

BSNT_02412___    996 TAAGCTGCAAAAGGCAATTAAATAG   1020
                     |||..|||||||..|..|.|||||.
BPUM_1343___m    984 TAAATTGCAAAAAACTTTAAAATAA   1008


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02412 and BPUM_1343

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
