Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02423 and BPUM_1352

See Amino acid alignment / Visit BSNT_02423 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:54
# Commandline: needle
#    -asequence dna-align/BSNT_02423___def.1.24716.seq
#    -bsequence dna-align/BPUM_1352___def.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02423___def-BPUM_1352___def.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02423___def-BPUM_1352___def.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02423___def
# 2: BPUM_1352___def
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 577
# Identity:     410/577 (71.1%)
# Similarity:   410/577 (71.1%)
# Gaps:          41/577 ( 7.1%)
# Score: 1402.0
# 
#
#=======================================

BSNT_02423___      1 TTGATTACTATGGAAAACATCGTACGTGACGGCCATCCAGCCCTCAGAGA     50
                     .|||||||.||||||.|.||||||||.||.||.|||||.|.|.|.|||.|
BPUM_1352___d      1 GTGATTACCATGGAAGATATCGTACGGGATGGACATCCCGTCTTAAGACA     50

BSNT_02423___     51 GACTGCCGAACCTGTTGAGCTGCCTCCAACTGATGCAGAAAAACAGCAGC    100
                     .||.||.|||.|.||.|||||.||.|||||.||.|..|||||||||||..
BPUM_1352___d     51 AACAGCTGAAGCGGTCGAGCTCCCGCCAACAGAAGAGGAAAAACAGCAAT    100

BSNT_02423___    101 TGGCCGACATGATCGAATTTGTTAAAAACAGCCAAAATCCGGAATTAGCC    150
                     |.||.||.|||||.|||||.||.|||||.||.|||.||.|.|||.|.||.
BPUM_1352___d    101 TAGCTGATATGATTGAATTCGTCAAAAATAGTCAAGATGCTGAAATGGCT    150

BSNT_02423___    151 GAAAAAT----ACAAGCTGCGCCCTGGCGTAGGACTCGCAGCTCCTCAAA    196
                     |||||.|    |    ||..|.||.|||||.||||||||.|||||.||||
BPUM_1352___d    151 GAAAAGTTTGGA----CTCAGACCCGGCGTTGGACTCGCTGCTCCGCAAA    196

BSNT_02423___    197 TTAATATCAAAAAACGAATGATCGCCGTTCA---TGCGGAAGATGCTTCC    243
                     ||||.||.|..||||||||||||||.|||||   ||.|||.||.|.|   
BPUM_1352___d    197 TTAACATTAGTAAACGAATGATCGCTGTTCACTGTGAGGATGAAGAT---    243

BSNT_02423___    244 GGTAAATTATACAGCTATGCTCTGTTTAATCCTAAG-ATCGTCAGCCATT    292
                     ||..|...||||||||||||.|| |||.|.||.|.| ||.|||||.||||
BPUM_1352___d    244 GGAGAGGAATACAGCTATGCCCT-TTTCAACCCACGCATTGTCAGTCATT    292

BSNT_02423___    293 CAGTTGAAAAAAGC-TACTTAACAAGCGGCGAGGGCTGCCTCTCTGTGGA    341
                     |.| |.||||.||| ||.|||||.|..||.||.||||||.|.|||||.||
BPUM_1352___d    293 CTG-TCAAAAGAGCTTATTTAACGACAGGTGAAGGCTGCTTATCTGTTGA    341

BSNT_02423___    342 TGAAGCGATTCCCGGTTATGTTCCCCGCTATGCTCGC------ATCAGAG    385
                     ||||||.|||||.||.|.|||.||.||.||      |      |||||.|
BPUM_1352___d    342 TGAAGCCATTCCTGGATTTGTCCCTCGATA------CCAAAAAATCAGGG    385

BSNT_02423___    386 TAAAAGGAACAACACTAGAAGGCGAAAATATTGATATTCGTTTAAAAGGA    435
                     |.||.|..|||||.||.|||||.||..|.|||||||||||..|||||||.
BPUM_1352___d    386 TGAAGGCCACAACGCTTGAAGGTGAGGACATTGATATTCGCCTAAAAGGG    435

BSNT_02423___    436 TTTCCGGCTATTGTGTTTCAGCATGAGATCGATCATTTGAACGGCGTTAT    485
                     ||.||.||.|||||||||||||||||.|||||.|||||.||||||.||||
BPUM_1352___d    436 TTCCCAGCCATTGTGTTTCAGCATGAAATCGACCATTTAAACGGCATTAT    485

BSNT_02423___    486 GTTCTATGATCATATTGATAAGGAAAATCCTTTCAAAGAACCTGAAAA--    533
                     |||.||||||||||||.|.|||||..|.||.|||...||.||.||.||  
BPUM_1352___d    486 GTTTTATGATCATATTCAAAAGGATCAGCCATTCGCTGAGCCAGACAACT    535

BSNT_02423___    534 ----TGCAATC-GCAATTGAGCGCTAA    555
                         |||.||| |||..|.|    |||
BPUM_1352___d    536 CTGTTGCGATCGGCAGATCA----TAA    558


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