Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02477 and BPUM_1383
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:58
# Commandline: needle
# -asequence dna-align/BSNT_02477___ctaE.1.24716.seq
# -bsequence dna-align/BPUM_1383___ctaE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02477___ctaE-BPUM_1383___ctaE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02477___ctaE-BPUM_1383___ctaE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02477___ctaE
# 2: BPUM_1383___ctaE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 636
# Identity: 476/636 (74.8%)
# Similarity: 476/636 (74.8%)
# Gaps: 27/636 ( 4.2%)
# Score: 1749.0
#
#
#=======================================
BSNT_02477___ 1 ATGCAAGTTCAAGAAAAATTCACCGCAGAAACCTTTCCAGCTTCTCCCGA 50
|||.|| |.|.|||||.|.||.||||||||.|||||.||||||||.||
BPUM_1383___c 1 ATGGAA---CCACAAAAAATGACAGCAGAAACTTTTCCGGCTTCTCCTGA 47
BSNT_02477___ 51 AAAAGTAACCCTGGAAGGGAAAAATAAATTTTTAGGCTTTTGGCTTTTTC 100
.||||..||..|.|||||.||.|||||.|||.|.||.||.|||.|.||||
BPUM_1383___c 48 GAAAGCTACGTTAGAAGGAAAGAATAAGTTTGTCGGGTTCTGGTTGTTTC 97
BSNT_02477___ 101 TTGGCGGAGAGACTGTTCTGTTTGCGTCTCTCTTCGCCACGTTTCTTGCG 150
||||.|||||.||||||||||||||.||.|||||.|||||||.|.|.|||
BPUM_1383___c 98 TTGGGGGAGAAACTGTTCTGTTTGCATCGCTCTTTGCCACGTATTTGGCG 147
BSNT_02477___ 151 CTTCGGAATTCAAATGCCGGTG-------ATCCGCCTACGACGGAAATGT 193
||....||.||.|||||.||.| | ||.||.||.||||
BPUM_1383___c 148 CTGAAAAACTCTAATGCAGGCGGAGCAAAA-------ACAACTGATATGT 190
BSNT_02477___ 194 TCGATGTGACACTTGTATTCATTGCCACAATGCTTCTATTAACGAGCAGT 243
|.|||.|.||||||||.||.||||||||||||||||||.|.|||||.|||
BPUM_1383___c 191 TTGATCTCACACTTGTCTTTATTGCCACAATGCTTCTACTGACGAGTAGT 240
BSNT_02477___ 244 TTAACGAGTGTGTACGCGATGTACCACATGAAGAACTTTTCCTTCGGCAA 293
||||||||||||||.||.|||||.||.|||||.||||||.||||....||
BPUM_1383___c 241 TTAACGAGTGTGTATGCAATGTATCATATGAAAAACTTTGCCTTTAAAAA 290
BSNT_02477___ 294 GATGCAGCTTTGGCTGGGAATTACGATTTTATTGGGGGCCGGCTTTTTAG 343
.||||||||||||||.||..|.||..|..||||.||.||....|||||||
BPUM_1383___c 291 AATGCAGCTTTGGCTTGGCGTGACTGTGCTATTAGGTGCTTCATTTTTAG 340
BSNT_02477___ 344 GACTGGAAATCTATGAGTTCAAGCATTACACCCATGAATTTGGCTTTACC 393
|..||||.||.|||||||||.|.|||||....||||..|.||..||||||
BPUM_1383___c 341 GGGTGGAGATTTATGAGTTCTATCATTATGTGCATGCGTATGATTTTACC 390
BSNT_02477___ 394 ATCACAAGCTCTGCCCTTGGTTCTGCGTTTTACACGCTTGTCGGTACACA 443
||.||.|||||.||.||||||||..|.||.||.||.|||||.||.||.||
BPUM_1383___c 391 ATTACCAGCTCAGCTCTTGGTTCCTCCTTCTATACACTTGTAGGAACTCA 440
BSNT_02477___ 444 CGGCGCCCACGTGGCATTTGGGCTTATG-TGGATCAGCACGCTTATGATC 492
|||.||.|||||.||.||.||.||| || |||||.|.|.|.||||||||.
BPUM_1383___c 441 CGGAGCTCACGTCGCCTTCGGACTT-TGCTGGATTACCGCTCTTATGATT 489
BSNT_02477___ 493 CGCAATGCTAAGAGAGGGCTGAATC--TGTATAC--GGCGCCTAAGTTTT 538
||.|| ||.|||| .||.||.|| |.||||| .|||||.||.|.||
BPUM_1383___c 490 CGAAA---TATGAGA-CGCGGACTCGATTTATACAATGCGCCAAAATATT 535
BSNT_02477___ 539 ACGTTGCCAGCCTTTATTGGCACTTTATTGATGTCGTGTGGGTCTTCATC 588
|.||.||.||.||.|||||||||||.||||||||.|||||||||||||||
BPUM_1383___c 536 ATGTAGCAAGTCTGTATTGGCACTTCATTGATGTTGTGTGGGTCTTCATC 585
BSNT_02477___ 589 TTTACCGTTGTATATTTAATGGGGATGGTGGGATAA 624
|||||||||||||||||||||||.||||||||||||
BPUM_1383___c 586 TTTACCGTTGTATATTTAATGGGAATGGTGGGATAA 621
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