Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02512 and BPUM_1412

See Amino acid alignment / Visit BSNT_02512 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:01
# Commandline: needle
#    -asequence dna-align/BSNT_02512___mraY.1.24716.seq
#    -bsequence dna-align/BPUM_1412___mraY.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02512___mraY-BPUM_1412___mraY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02512___mraY-BPUM_1412___mraY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02512___mraY
# 2: BPUM_1412___mraY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 979
# Identity:     753/979 (76.9%)
# Similarity:   753/979 (76.9%)
# Gaps:           8/979 ( 0.8%)
# Score: 2832.0
# 
#
#=======================================

BSNT_02512___      1 ATGCTTGAGCAAGTCATTCTGTTTACAATTTTAATGGGGTTTTTAATTAG     50
                     ||||||||.||.||.||..||||||||||..|||||||.||||||||.||
BPUM_1412___m      1 ATGCTTGAACAGGTGATATTGTTTACAATCATAATGGGATTTTTAATCAG     50

BSNT_02512___     51 TGTTCTGCTCTCTCCGATTCTTATTCCGTTTTTAAGAAGATTAAAATTCG    100
                     ||||||..|.||.||||||.||||.||||||||||||||..|||||||.|
BPUM_1412___m     51 TGTTCTTTTATCCCCGATTTTTATACCGTTTTTAAGAAGGCTAAAATTTG    100

BSNT_02512___    101 GCCAGAGTATTAGAGAAGAAGGACCGAAATCACATCAGAAAAAATCAGGG    150
                     |.||.|||||||||||||||||.|||.||||.||.||.||.|||||.||.
BPUM_1412___m    101 GTCAAAGTATTAGAGAAGAAGGCCCGCAATCGCACCAAAAGAAATCTGGA    150

BSNT_02512___    151 ACACCGACAATGGGCGGGGTCATGATCATACTTTCTATCA-TAGTGACAA    199
                     ||.||||||||||||||..|||||||.||..||||||||| || |.||||
BPUM_1412___m    151 ACGCCGACAATGGGCGGCATCATGATTATCTTTTCTATCACTA-TTACAA    199

BSNT_02512___    200 CAATTGTTATGA-CACAGAAGTTTTCAGAAATAAGCCCCGAAATGGTGCT    248
                     |||||||.|||| || |.||.|||||.||.||.||.||.||||||.|..|
BPUM_1412___m    200 CAATTGTGATGATCA-ACAAATTTTCTGAGATTAGTCCAGAAATGTTTTT    248

BSNT_02512___    249 GCTTCTGTTTGTTACGCTAGGCTACGGTTTGCTTGGCTTTTTAGATGATT    298
                     .||..|.|||||.||.||.||.|||||..|..|.||.|||||||||||||
BPUM_1412___m    249 ACTGTTATTTGTCACACTTGGTTACGGCCTATTAGGATTTTTAGATGATT    298

BSNT_02512___    299 ACATCAAGGTTGTCATGAAGCGCAATCTTGGATTGACATCAAAGCAAAAG    348
                     |.||.||.||.|..|||||.||.|||||||||||.|||||.||.||.||.
BPUM_1412___m    299 ATATTAAAGTAGCGATGAAACGAAATCTTGGATTAACATCGAAACAGAAA    348

BSNT_02512___    349 CTGATCGGACAAATTATTATTGCAGTTGTATTTTACGCCGTGTATCATTA    398
                     .|.|||||.||||||.|.||.||.||..|.|||||.||.||.|..|||||
BPUM_1412___m    349 TTAATCGGTCAAATTGTGATCGCTGTGATCTTTTATGCAGTTTTCCATTA    398

BSNT_02512___    399 CTACAATTTTGCGACGGATATTCGCATTCCTGGAACTGACTTATCA--TT    446
                     .||..|.|||||.|||...|||||||||||.|||||.|||  .|||  ||
BPUM_1412___m    399 TTATCAGTTTGCAACGACAATTCGCATTCCAGGAACAGAC--GTCAGCTT    446

BSNT_02512___    447 TGATCTTGGCTGGGCTTACTTTATCCTTGTGCTCTTTATGCTTGTCGGCG    496
                     ||||.|.||.||||||||||||||||||||..||||.|||||||||||.|
BPUM_1412___m    447 TGATTTAGGATGGGCTTACTTTATCCTTGTTGTCTTCATGCTTGTCGGAG    496

BSNT_02512___    497 GATCAAACGCAGTTAACCTGACTGACGGCCTTGACGGGTTATTATCCGGT    546
                     |.||.||.||.||.|||.|.||.||.||.||.||.||..|.|||||.||.
BPUM_1412___m    497 GTTCTAATGCCGTAAACTTAACAGATGGACTGGATGGTCTCTTATCTGGA    546

BSNT_02512___    547 ACTGCGGCGATTGCCTTTGGCGCCTTTGCCATTCTGGCATGGAATCAGTC    596
                     ||.||.||.|||||.||.||.||.|||||.||.|||||.||||||||.||
BPUM_1412___m    547 ACAGCTGCTATTGCTTTCGGTGCATTTGCTATACTGGCTTGGAATCAATC    596

BSNT_02512___    597 TCAATATGACGTAGCGATTTTCTCAGTTGCCGTTGTCGGTGCAGTTCTGG    646
                     .||.|||||.|||||.||.||||||||.||.||||..||.||.||.||.|
BPUM_1412___m    597 GCAGTATGATGTAGCAATCTTCTCAGTAGCTGTTGCAGGCGCCGTCCTTG    646

BSNT_02512___    647 GCTTCCTTGTATTTAATGCTCATCCGGCCAAAGTTTTTATGGGAGATACG    696
                     ||||||||||.|||||.||.|||||.||.|||||.||||||||.|||||.
BPUM_1412___m    647 GCTTCCTTGTGTTTAACGCACATCCTGCAAAAGTATTTATGGGTGATACA    696

BSNT_02512___    697 GGATCGCTTGCATTGGGAGGAGCCATCGTTACCATTGCCATTTTAACGAA    746
                     ||.||.||.||.||.||.|||||.||.||..|.|||||.|||||||||||
BPUM_1412___m    697 GGTTCTCTAGCTTTAGGCGGAGCTATTGTAGCAATTGCGATTTTAACGAA    746

BSNT_02512___    747 ATTAGAGATCCTGCTGGTTATCATCGGCGGTGTATTCGTTATCGAGACAT    796
                     ..|.||.||..|.||.||.||.||.||.||.|||||.|||.|.|||||.|
BPUM_1412___m    747 GCTTGAAATTTTACTTGTCATTATTGGTGGGGTATTTGTTGTAGAGACGT    796

BSNT_02512___    797 TATCTGTTATTTTGCAGGTCATCAGCTTTAAAACGACAGGTAAACGAATC    846
                     ||||.||||||.|.||.|||||...|||||||||.||.||.|||.|||||
BPUM_1412___m    797 TATCCGTTATTCTTCAAGTCATTTCCTTTAAAACAACCGGCAAAAGAATC    846

BSNT_02512___    847 TTTAAAATGAGTCCGCTTCATCACCATTATGAGCTTGTCGGCTGGTCTGA    896
                     |||||.||||||||.|||||.|||||.|||||..|.||.||||||||.||
BPUM_1412___m    847 TTTAAGATGAGTCCACTTCACCACCACTATGAATTAGTTGGCTGGTCAGA    896

BSNT_02512___    897 ATGGAGAGTAGTCGTGACGTTTTGGGCTGCGGGACTTTTGCTTGCCGTTT    946
                     .|||||||||||.||.||.||.|||.|.||.||..|.||.||.||.||||
BPUM_1412___m    897 GTGGAGAGTAGTTGTCACCTTCTGGACAGCTGGTTTATTACTGGCTGTTT    946

BSNT_02512___    947 TAGGAATTTACATCGAGGTGTGGTTATAA    975
                     |||||||||||||||||||||||||||||
BPUM_1412___m    947 TAGGAATTTACATCGAGGTGTGGTTATAA    975


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02512 and BPUM_1412

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
