Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02524 and BPUM_1421
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:02
# Commandline: needle
# -asequence dna-align/BSNT_02524___ftsA.1.24716.seq
# -bsequence dna-align/BPUM_1421___ftsA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02524___ftsA-BPUM_1421___ftsA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02524___ftsA-BPUM_1421___ftsA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02524___ftsA
# 2: BPUM_1421___ftsA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1349
# Identity: 1004/1349 (74.4%)
# Similarity: 1004/1349 (74.4%)
# Gaps: 52/1349 ( 3.9%)
# Score: 3670.0
#
#
#=======================================
BSNT_02524___ 1 ATGAACAACAATGAACTTTACGTCAGTCTTGACATCGGTACGTCCAATAC 50
|||||||||||||||.||||||||||.||||||||||||||.|||||||.
BPUM_1421___f 1 ATGAACAACAATGAAATTTACGTCAGCCTTGACATCGGTACATCCAATAT 50
BSNT_02524___ 51 AAAAGTGATCGTCGGAGAAATGACAGATGATTCCCTTAATATTATCGGTG 100
||||||.|||||||||||||||.|.||||||||.|||||.|||||.||||
BPUM_1421___f 51 AAAAGTCATCGTCGGAGAAATGGCGGATGATTCGCTTAACATTATAGGTG 100
BSNT_02524___ 101 TGGGAAATGTACCGTCTGAAGGGTTGAAAAAAGGCTCAATCGTTGATATA 150
|.||||||||.||.||.||.|||||.||||||||.||.||.|||||||||
BPUM_1421___f 101 TTGGAAATGTCCCTTCAGAGGGGTTAAAAAAAGGATCGATTGTTGATATA 150
BSNT_02524___ 151 GATGAGACCGTTCATTCTATAAGAAAAGCGTTTGACCAAGCTGAAAGAAT 200
||||||||.|||||||||||.|||.||||.|||||.||.|||||.|||||
BPUM_1421___f 151 GATGAGACAGTTCATTCTATTAGACAAGCATTTGAACAGGCTGAGAGAAT 200
BSNT_02524___ 201 GGTAGGTTTTCCGCTTA-GAAAAGCTATTGTCGGCGTTAATGGAAATTAT 249
|||||||||||| .||| .||||||.||||||||..||||.|||||..|.
BPUM_1421___f 201 GGTAGGTTTTCC-TTTACAAAAAGCGATTGTCGGAATTAACGGAAACCAC 249
BSNT_02524___ 250 ATCAATATTCAAGATACAAACGGTGTTGTAGCAGTTTCCAGTGAAAATAA 299
||..|||||||..||||.|.|||.||.||.|||||.||.||||||||.||
BPUM_1421___f 250 ATTCATATTCAGAATACGAGCGGCGTAGTCGCAGTATCTAGTGAAAACAA 299
BSNT_02524___ 300 AGAAATTCAGGTTGAAGACGTACGCCGTGTCATGGAGGCGGCACAGGTTG 349
||||||.||.|.||||||.||..|.||||||.|.||.||.|||||.||.|
BPUM_1421___f 300 AGAAATACATGCTGAAGATGTGAGACGTGTCTTAGATGCTGCACAAGTAG 349
BSNT_02524___ 350 TTTCAGTACCGCACGAACAGCTGATTGTCGATGTTATTCCTAAACAGTTT 399
|.||..|.||.||.|||||.||..|.||.||.||.|||||.|.|||.|||
BPUM_1421___f 350 TATCTATTCCTCAAGAACATCTCGTCGTAGACGTGATTCCGAGACAATTT 399
BSNT_02524___ 400 ATCGTAGATGGAAGAGATGAAATCACCGACCCGAAAAAAATGCTGGGGGT 449
|||||.||.|||||||||||.|||||.||.||||||||||||||.||.||
BPUM_1421___f 400 ATCGTGGACGGAAGAGATGAGATCACAGATCCGAAAAAAATGCTTGGTGT 449
BSNT_02524___ 450 GCGTTTAGAAGTAGAGGGCACCTTGATCACCGGTTCAAAAACAATCTTAC 499
.||..||||.||.||.||..|.||.||.||.|||||.|||||.||..|||
BPUM_1421___f 450 TCGGCTAGAGGTGGAAGGATCGTTAATTACAGGTTCTAAAACGATTCTAC 499
BSNT_02524___ 500 ATAATTTACTCCGCTGCGTTGAAAGAGCTGGTATTGAAATAACTGATATT 549
||||.|..|||||.||.||.|||||||||||.||||||||.|..|||||.
BPUM_1421___f 500 ATAACTGGCTCCGATGTGTAGAAAGAGCTGGAATTGAAATTATGGATATA 549
BSNT_02524___ 550 TGCCTTCAGCCGCTGGCAGCCGGTTCTGCTGCATTATCAAAGGACGAGAA 599
|||.|.|||||.||.|||.|.||.||.||.||||||||.||.||.||.||
BPUM_1421___f 550 TGCTTGCAGCCACTCGCATCGGGCTCAGCAGCATTATCGAAAGATGAAAA 599
BSNT_02524___ 600 AAACCTTGGTGTGGCTCTCATTGATATAGGGGGAGGGTCAACAACCATTG 649
|||.||.||.||.|||||..|.|||||.||.||.||.||.|||||.|||.
BPUM_1421___f 600 AAATCTCGGGGTAGCTCTTGTCGATATCGGCGGCGGATCTACAACGATTT 649
BSNT_02524___ 650 CCGTATTCCAGAACGGACATCTCACTTCTAC---CCGTGTCATTCCTCTC 696
|||||||..|.|||||.||||||..|||||| |.|| ||.|||.|.
BPUM_1421___f 650 CCGTATTTGAAAACGGGCATCTCTATTCTACTCACAGT---ATCCCTTTG 696
BSNT_02524___ 697 GGAGGCGAAAATATCACCAAAGATATCTCCATCGGATTGAGAACGTCAAC 746
||.||.||.||.||.||.||||||.|.||.||.|||.|.|||||.||.||
BPUM_1421___f 697 GGCGGAGAGAACATAACAAAAGATTTGTCTATAGGACTTAGAACTTCCAC 746
BSNT_02524___ 747 AGAAGAAGCAGAACGCGTGAAAAAGCAATTTGGACATGCCTACTATGACG 796
.||||||||.|||||..|.|||||.||||||||.|||||.|..|||||.|
BPUM_1421___f 747 TGAAGAAGCTGAACGAATCAAAAAACAATTTGGGCATGCGTTTTATGATG 796
BSNT_02524___ 797 AAGCCT---CGGAAGATGAAATTTTTGAGGTAACCGTTATAGGCACCAAT 843
|.||.| ||||||| ||.| |||||.||..|.||.||.||.||..||
BPUM_1421___f 797 AGGCATCGACGGAAGA-GACA--TTTGAAGTTTCTGTGATCGGTACTGAT 843
BSNT_02524___ 844 CAAAAACAAACATTTACACAGCAAGAAGCAGCGAATATCATTGAAGCGAG 893
|||||||||||.|.||||||||..||.|||||.||.||.|||||||||.|
BPUM_1421___f 844 CAAAAACAAACGTATACACAGCTTGATGCAGCTAACATTATTGAAGCGCG 893
BSNT_02524___ 894 AGTAGAAGAAAT-----TCTTGAAATTGTTTCAGAAGAGCTTCGCAGTAT 938
..|.||.||||| ||| |||||.||||.||..|..|.|.|||
BPUM_1421___f 894 GCTGGAGGAAATCTTGCTCT-----TTGTTGCAGAGGAATTAAGAAATAT 938
BSNT_02524___ 939 GGGAATTACCGATCTGCCGGGAGGCTTCGTGCTGACAGGAGGACAAGCAG 988
|||..||...|||.||||.||.||.|||||.||.|||||.||||||||||
BPUM_1421___f 939 GGGTGTTCATGATTTGCCTGGTGGATTCGTTCTCACAGGTGGACAAGCAG 988
BSNT_02524___ 989 CTATGCCGGGTGTCATGTCTTTGGCACAGGATGTGCTGCAAAACAATGTC 1038
|.||.||.|||.||.|.|||.|.|||||....||..|||||||||||||.
BPUM_1421___f 989 CCATACCAGGTATCCTTTCTCTTGCACAAACGGTTTTGCAAAACAATGTT 1038
BSNT_02524___ 1039 AGAGTGGCAAGCCCGAATTATATCGGTGTAAGAGATCCTCAATATATGAC 1088
||..|.|||||.||||||||||||||.||.|||||.||||||||||||||
BPUM_1421___f 1039 AGGATTGCAAGTCCGAATTATATCGGGGTGAGAGAGCCTCAATATATGAC 1088
BSNT_02524___ 1089 GGGAGTGGGCCTGATCCAATTCGCCTGCCGGAATGCAAGAATCCAAGGCA 1138
.||||||||.||||||||.||.||.|..||.|||||||..||.||.||||
BPUM_1421___f 1089 AGGAGTGGGTCTGATCCACTTTGCTTATCGCAATGCAAAGATTCAGGGCA 1138
BSNT_02524___ 1139 GAAAAATAGGCTTTAAGATGCCTGAAGAAGCGATACAGGAAATCGCAGTC 1188
||.|..|.||.||..|.|||||.||.||.|||.|.||.||| |.||.|
BPUM_1421___f 1139 GACAGGTTGGATTCCAAATGCCAGATGAGGCGTTTCATGAA---GTAGGC 1185
BSNT_02524___ 1189 TCATCATCTGAGGAACA-AGAGCAG----CATCATCACCA------AAAT 1227
.|||| || .||||.| |.||..||||| |||
BPUM_1421___f 1186 GCATC----------CATGGAGCCGGTTTCTTCTGCACCACAAGTGAAA- 1224
BSNT_02524___ 1228 GAGGTGCAGCAGCGGCCAAAAGGAAAACAAAAAACACAAGCCGA---ACA 1274
||.|.|||||...|.||.||||.||||||||||.|||||...|| |.|
BPUM_1421___f 1225 GAAGCGCAGCCAAGACCGAAAGTAAAACAAAAAGCACAACAAGAGACAAA 1274
BSNT_02524___ 1275 TAATAAACAGAGCAAAATGAAAAAACTATTAAGCATGTTTTGGGAATAG 1323
|||.||||.|.|||||||||||||||||||.|..|||||.|||||||||
BPUM_1421___f 1275 TAAAAAACCGGGCAAAATGAAAAAACTATTTAATATGTTCTGGGAATAG 1323
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