Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02545 and BPUM_1441

See Amino acid alignment / Visit BSNT_02545 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:04
# Commandline: needle
#    -asequence dna-align/BSNT_02545___divIVA.1.24716.seq
#    -bsequence dna-align/BPUM_1441___divIVA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02545___divIVA-BPUM_1441___divIVA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02545___divIVA-BPUM_1441___divIVA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02545___divIVA
# 2: BPUM_1441___divIVA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 495
# Identity:     406/495 (82.0%)
# Similarity:   406/495 (82.0%)
# Gaps:           0/495 ( 0.0%)
# Score: 1674.0
# 
#
#=======================================

BSNT_02545___      1 ATGCCATTAACGCCAAATGATATTCACAACAAGACGTTTACAAAAAGTTT     50
                     .||||||||||.||.|||||||||||.||.||.|||||.||||||||.||
BPUM_1441___d      1 TTGCCATTAACACCTAATGATATTCATAATAAAACGTTCACAAAAAGCTT     50

BSNT_02545___     51 TCGCGGATATGATGAAGATGAAGTAAATGAATTCCTAGCCCAAGTCAGAA    100
                     |||||||||||||||||||||||||||.||.||..||..||||||..|.|
BPUM_1441___d     51 TCGCGGATATGATGAAGATGAAGTAAACGAGTTTTTAAGCCAAGTACGTA    100

BSNT_02545___    101 AAGATTACGAAATTGTTCTCCGCAAGAAAACTGAGCTTGAAGCGAAAGTC    150
                     |||||||||||||.||.||.|||||.||.|.|||.||.||||..||.||.
BPUM_1441___d    101 AAGATTACGAAATCGTGCTTCGCAAAAAGAATGAACTCGAAGAAAAGGTA    150

BSNT_02545___    151 AATGAGCTAGATGAAAGAATCGGACACTTTGCCAATATTGAGGAAACATT    200
                     ||.|||||.||.||||||.|.||.||.|||||.|..|||||.|||||.||
BPUM_1441___d    151 AACGAGCTTGACGAAAGACTAGGTCATTTTGCGACAATTGAAGAAACGTT    200

BSNT_02545___    201 GAATAAATCAATTTTAGTTGCTCAAGAAGCGGCTGAAGACGTAAAACGCA    250
                     .||.|||||||||.|.||.||.||.|||||.||.||||||||.|||||..
BPUM_1441___d    201 AAACAAATCAATTCTTGTGGCGCAGGAAGCAGCAGAAGACGTCAAACGTC    250

BSNT_02545___    251 ATTCTCAAAAAGAGGCAAAGCTGATCGTTCGGGAAGCGGAGAAAAACGCT    300
                     |||||.|.|||||.|||||.||||||.||||.|||||.||||||||.||.
BPUM_1441___d    251 ATTCTGATAAAGAAGCAAAACTGATCATTCGTGAAGCAGAGAAAAATGCA    300

BSNT_02545___    301 GATCGCATTATCAACGAATCGTTATCAAAATCAAGAAAAATTGCAATGGA    350
                     |||||.||||||||||||.||.|.||.|||||||||||.|||||.|||||
BPUM_1441___d    301 GATCGTATTATCAACGAAGCGCTCTCTAAATCAAGAAAGATTGCGATGGA    350

BSNT_02545___    351 AATTGAAGAGCTGAAAAAACAGTCTAAAGTGTTCAGAACACGTTTCCAAA    400
                     |||.|||||||||||.||.|||||.|||||.||.|||||.||.|||||||
BPUM_1441___d    351 AATCGAAGAGCTGAAGAAGCAGTCGAAAGTCTTTAGAACTCGCTTCCAAA    400

BSNT_02545___    401 TGCTGATTGAAGCTCAGCTTGATCTTCTGAAAAATGACGATTGGGATCAT    450
                     ||||.||.||||||||||||||||||||.|||||||||||||||||||||
BPUM_1441___d    401 TGCTCATCGAAGCTCAGCTTGATCTTCTAAAAAATGACGATTGGGATCAT    450

BSNT_02545___    451 CTCCTTGAGTATGAAGTCGACGCTGTATTTGAGGAAAAGGAATAA    495
                     .|.||.||.||||||||.||||||||.|||||.|||||.||.|||
BPUM_1441___d    451 TTACTGGAATATGAAGTTGACGCTGTCTTTGACGAAAAAGATTAA    495


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