Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02552 and BPUM_1445
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:04
# Commandline: needle
# -asequence dna-align/BSNT_02552___ylyB.1.24716.seq
# -bsequence dna-align/BPUM_1445___ylyB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02552___ylyB-BPUM_1445___ylyB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02552___ylyB-BPUM_1445___ylyB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02552___ylyB
# 2: BPUM_1445___ylyB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 932
# Identity: 696/932 (74.7%)
# Similarity: 696/932 (74.7%)
# Gaps: 37/932 ( 4.0%)
# Score: 2466.0
#
#
#=======================================
BSNT_02552___ 1 ATGAATCAAATTGATATAACCGCTTCAGAAGAACAAAAAAGTGAGCGGAT 50
|||||||||.|..||||..|||.||||||||||||||.||||||.|||.|
BPUM_1445___y 1 ATGAATCAAGTAAATATTGCCGTTTCAGAAGAACAAACAAGTGAACGGCT 50
BSNT_02552___ 51 TGATAAATTT-TTGGCATCGTCTGAGAA--TGATTGGTCAAGAACCCAGG 97
|||||||||| |..||| |||| |||| .||.||||||||||||||.|
BPUM_1445___y 51 TGATAAATTTCTAAGCA-CGTC--AGAACCAGAATGGTCAAGAACCCAAG 97
BSNT_02552___ 98 TTCAGCAATGGGTAAAAGACGGACAGGTTGTCGTGAA-CGGAAGCGCGGT 146
|.|||||.|||||||||||.||.|.|.|.|..||.|| .|||||| ..||
BPUM_1445___y 98 TCCAGCAGTGGGTAAAAGATGGGCTGATCGAAGTAAATGGGAAGC-AAGT 146
BSNT_02552___ 147 GAAAGCGAATTATAAAATTCAGCCGGGTGATCAGGTGACCGTCACTGTAC 196
||||||.|||||.|||.|.||..|.||.|||||..|.|..|||....|.|
BPUM_1445___y 147 GAAAGCCAATTACAAAGTACAAGCTGGAGATCAAATTAAAGTCGAGATTC 196
BSNT_02552___ 197 CCGAACCGGAAGCGCTCGACGTCCTGGCAGAGCCTATGGATCTGGATATT 246
|.|||||.|||||.||.||.||....|||||..|.||||||||.|||||.
BPUM_1445___y 197 CAGAACCAGAAGCACTAGATGTAGAAGCAGAAGCAATGGATCTTGATATA 246
BSNT_02552___ 247 TATTATGAGGA-CCAGGATGTGCTGGTCGTCAACAAACCTCGCGGAATGG 295
||||||||.|| .|| ||||||||.||.||.||.|||||.||.|||||||
BPUM_1445___y 247 TATTATGAAGATGCA-GATGTGCTCGTAGTGAATAAACCACGAGGAATGG 295
BSNT_02552___ 296 TTGTTCACCCAGCACCCGGGCATCTTACGGGCACACTTGTAAACGGCCTT 345
|.|||||.|||||.||.||.|||.|..|.||.|||||.|||||.||.||.
BPUM_1445___y 296 TCGTTCATCCAGCGCCAGGTCATGTGTCAGGAACACTAGTAAATGGTCTA 345
BSNT_02552___ 346 ATGGCTCATTGCACAGACCTTTCCGGAATAAATGGCGTGATGCGTCCGGG 395
|||||.|||||||||||..|.||.||.||.|||||.|||||||||||.||
BPUM_1445___y 346 ATGGCCCATTGCACAGATTTATCAGGGATTAATGGAGTGATGCGTCCTGG 395
BSNT_02552___ 396 TATTGTTCACAGAATCGATAAGGACACGTCCGGTTTATTAATGGTGGCGA 445
.||.||.|||.|.||.|||||.||||||||.||..|.||||||||.||.|
BPUM_1445___y 396 CATAGTCCACCGCATTGATAAAGACACGTCTGGGCTGTTAATGGTCGCAA 445
BSNT_02552___ 446 AAAATGATATGGCACACGAGTCACTCGTAAACCAATTGGTCAACAAAACG 495
||||.||||||||.||.||.||||||||.||.|||.|.||....||.||.
BPUM_1445___y 446 AAAACGATATGGCGCATGAATCACTCGTCAATCAACTTGTGGCTAAGACT 495
BSNT_02552___ 496 GTCACCCGAAAATATACGGCCGTTGTCCACGGGCTTATTTCTCACGATGA 545
|||||..||||||||||.||.|||||.||.||..||||....||.||| |
BPUM_1445___y 496 GTCACAAGAAAATATACAGCTGTTGTTCATGGCATTATCCAGCATGAT-A 544
BSNT_02552___ 546 C-GGCACAATTGACGCGCCGATCGGACGAGATAAGAAAGACCGTCAAAGC 594
| ||.||||||||.||.||.||.||..||||.||.||||||||.||||||
BPUM_1445___y 545 CAGGTACAATTGATGCCCCAATTGGCAGAGACAAAAAAGACCGCCAAAGC 594
BSNT_02552___ 595 ATGACCGTGACACGTGATGG--CAAAAGC--GCTGTCACTCATTTTCATG 640
|||||.||||||...||..| ||||| | ||.||||||||||||.|||
BPUM_1445___y 595 ATGACAGTGACAAAAGAAAGTTCAAAA-CAAGCCGTCACTCATTTTGATG 643
BSNT_02552___ 641 TACTAGAGCGTTTTCAGGATTTTACGTTAGTGGAATGCCAGCTTGAAACA 690
|..|.||.||.|||.|.|||||.|||.|.|||||.||||..|||||||||
BPUM_1445___y 644 TGATTGAACGCTTTGACGATTTCACGGTGGTGGAGTGCCGACTTGAAACA 693
BSNT_02552___ 691 GGGAGAACCCATCAAATTCGTGTTCATATGAGATATATCGGCT-TCCCAT 739
||.|||||.|||||.||||||||||||||||.||||||||||| |||..|
BPUM_1445___y 694 GGAAGAACACATCAGATTCGTGTTCATATGAAATATATCGGCTATCCGCT 743
BSNT_02552___ 740 TAGCAGGCGATCCGAAATACGGCCCAAGAAAAACAATCGACTTTAATGGC 789
| |||||.|||||||||||.||.||.|||||.|||.||||.||.|||||.
BPUM_1445___y 744 T-GCAGGAGATCCGAAATATGGACCGAGAAAGACAGTCGATTTCAATGGT 792
BSNT_02552___ 790 CAAGC-GCTTCACGCGGGAGTTTTAGGTTTTGACCATCCACGAACAGGAG 838
| ||| |||.||.||.||.||||||||.|||||.||||||.|||||||.|
BPUM_1445___y 793 C-AGCTGCTGCATGCAGGTGTTTTAGGATTTGATCATCCAAGAACAGGCG 841
BSNT_02552___ 839 AATATGTCGAATTTGAAGCGCCGCTTCCTGAGGATAT----GGCAGAATT 884
|||||.||||.||...|||.||..||||||..||||| ||| ||
BPUM_1445___y 842 AATATATCGAGTTCACAGCACCAGTTCCTGCTGATATGCGGGGC----TT 887
BSNT_02552___ 885 AATCGAAAACCTC----AGAAAAAATGGTTGA 912
.||||| .|| |||||.||.|.||||
BPUM_1445___y 888 TATCGA----TTCATTAAGAAATAACGATTGA 915
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