Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02560 and BPUM_1452

See Amino acid alignment / Visit BSNT_02560 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:06
# Commandline: needle
#    -asequence dna-align/BSNT_02560___pyrK.1.24716.seq
#    -bsequence dna-align/BPUM_1452___pyrK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02560___pyrK-BPUM_1452___pyrK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02560___pyrK-BPUM_1452___pyrK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02560___pyrK
# 2: BPUM_1452___pyrK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 801
# Identity:     539/801 (67.3%)
# Similarity:   539/801 (67.3%)
# Gaps:          54/801 ( 6.7%)
# Score: 1658.5
# 
#
#=======================================

BSNT_02560___      1 ATGAAAAAAGCGTATTTGACAGTATGT-TCTAA-CCAGCAAATTGCAGAC     48
                     |||||||||||.||.|||||.|| .|| ||.|| |.|| |.||.||.||.
BPUM_1452___p      1 ATGAAAAAAGCATACTTGACGGT-CGTCTCAAATCGAG-AGATCGCTGAT     48

BSNT_02560___     49 CGGGTGTTT--CAAATGGTTCTGAAAGGGGAGCTTGTCCAAGGG-----T     91
                     |  .|.|||  .|||||....|.|||||.||.|||||     ||     |
BPUM_1452___p     49 C--ATATTTACGAAATGACATTAAAAGGTGACCTTGT-----GGACTCCT     91

BSNT_02560___     92 TTACAACCCCTGGACAGTTCCTTCATCTTAAAGTGAGCGAAGCGGTTACG    141
                     ||..|||..|||||||.||.||||||.|.||.||.|||||..|..|.||.
BPUM_1452___p     92 TTCAAACGGCTGGACAATTTCTTCATATCAAGGTCAGCGAGTCCATGACA    141

BSNT_02560___    142 CCTCTTTTGAGAAGGCCGATCAGCATCGCAGACGTCAACTTT------GA    185
                     ||.||..|||||||.||||||||.||.||      |||..||      ||
BPUM_1452___p    142 CCGCTGCTGAGAAGACCGATCAGTATTGC------CAATATTCATGCCGA    185

BSNT_02560___    186 AAAAAATGAAGTCACCATCATTTATCGGGTAGATGGGGAAGGGACAAGAC    235
                     .|||.|.||||..||||||||||||||.|.|||.||.||.||.||||..|
BPUM_1452___p    186 GAAACAAGAAGCAACCATCATTTATCGCGCAGAGGGAGAGGGCACAAAGC    235

BSNT_02560___    236 TCTTGTCACTGAAGC-AGCAGGGAGAACTTGTGGATGTCCTCGGGCCTTT    284
                     ||.|.||.|..|||| || |.||.|||....|.|||||..|.|||||..|
BPUM_1452___p    236 TCCTTTCCCAAAAGCGAG-ATGGGGAATCCATCGATGTATTAGGGCCGCT    284

BSNT_02560___    285 GGGAAATGGCT---TTCCT---GTTAATGAAGTTCAACCCGGAAAGACGG    328
                     .||.||.||.|   .||||   |||      |||||..|.||..||||.|
BPUM_1452___p    285 TGGCAACGGATATGATCCTTCAGTT------GTTCAGTCAGGTCAGACAG    328

BSNT_02560___    329 CTTTGCTGGTAGGAGGCGGAGTAGGTGTGCCGCCTCTCCAAGAGCTGTCG    378
                     |.||.||.||.||.||.|||.|.||.||.||||||.|..|.||||||||.
BPUM_1452___p    329 CGTTACTAGTCGGTGGTGGAATTGGAGTACCGCCTTTATATGAGCTGTCC    378

BSNT_02560___    379 AAACGCTTGATTGAAAAAGGGGTAAATGTCATCCACGTTTTAGGATTCCA    428
                     ||.||.||.|...|||||||.||.|..||||..||.||..|.||.||.||
BPUM_1452___p    379 AAGCGATTAACGAAAAAAGGCGTCATCGTCAAGCATGTCCTTGGCTTTCA    428

BSNT_02560___    429 ATCGGCAAAGGATGTTTTTTACGAGGAAGAATGCC-GGCAGTACGGAGAC    477
                     ||||..|||||||||.|||||||||||..|||.|| .|||.| ||||||.
BPUM_1452___p    429 ATCGAAAAAGGATGTATTTTACGAGGAGAAATTCCAAGCACT-CGGAGAT    477

BSNT_02560___    478 ACGTATGTGGCAACAGCTGACGGAAGCTACGGGGAAACCGGATTTGTCAC    527
                     ||.|...|.|||||||.||||||.|..||.||.|..|..|||||.||.||
BPUM_1452___p    478 ACATTCATTGCAACAGTTGACGGGACATATGGCGCGAAGGGATTCGTGAC    527

BSNT_02560___    528 AGATGTGATTAAACGGAAAAATCTAGAG-TTTGATATCCTCCTCAGCTGC    576
                     |.||||.|||.||..|||..|| |.||| ||||||.||.|.||....|||
BPUM_1452___p    528 AAATGTCATTGAAGAGAATGAT-TTGAGTTTTGATGTCATGCTTTCTTGC    576

BSNT_02560___    577 GGTCCGACACCGATGCTCAAGGCGTTAAAACAGGAATATGCCCATAAAGA    626
                     ||.|||||.||.|||.|.||.|||.|||||.|...||||.||.||||...
BPUM_1452___p    577 GGGCCGACTCCTATGTTAAAAGCGCTAAAAGACTCATATCCCGATAAGCC    626

BSNT_02560___    627 AGTATATCTGTCCATGGAGGAACGAATGGGCTGCGGAATCGGCGCATGCT    676
                     .||.||..|.||.|||||.|||||||||||||||||||||||.||.||||
BPUM_1452___p    627 TGTCTACATTTCAATGGAAGAACGAATGGGCTGCGGAATCGGTGCTTGCT    676

BSNT_02560___    677 TCGCGTGTGTGTGCCATACAAACGAAAGTGAGACATCCTATGTAAAAGTA    726
                     |.||.|||||.||.||||||.||.|....||.|.|.|.||.||.|||||.
BPUM_1452___p    677 TTGCCTGTGTCTGTCATACAGACCAGCACGAAAAAGCGTACGTCAAAGTC    726

BSNT_02560___    727 TGTCTCGACGGGCCTGTATTTAAAGCTCAGGAGGTGGCGCTGTAA-----    771
                     |||||.|||||.||||||||||||||..||||||||||..|||.|     
BPUM_1452___p    727 TGTCTGGACGGACCTGTATTTAAAGCAGAGGAGGTGGCATTGTCATGCTA    776

BSNT_02560___    771 -    771
                      
BPUM_1452___p    777 A    777


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02560 and BPUM_1452

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
