Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02567 and BPUM_1458
See
Amino acid alignment /
Visit
BSNT_02567 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:06
# Commandline: needle
# -asequence dna-align/BSNT_02567___sat.1.24716.seq
# -bsequence dna-align/BPUM_1458___sat.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02567___sat-BPUM_1458___sat.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02567___sat-BPUM_1458___sat.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02567___sat
# 2: BPUM_1458___sat
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1180
# Identity: 832/1180 (70.5%)
# Similarity: 832/1180 (70.5%)
# Gaps: 74/1180 ( 6.3%)
# Score: 2761.0
#
#
#=======================================
BSNT_02567___ 1 ATGAGCTTAGCACCACACGGAGGAACATTAGTAAACAGAGTAGATGAATC 50
|||||.|||.|||||||.||.||...||||.|.||..|||||.|||||..
BPUM_1458___s 1 ATGAGTTTAACACCACATGGTGGCGTATTAATTAATCGAGTAAATGAAGA 50
BSNT_02567___ 51 ATATGATGTGAG--CGGCATTCAAAAAGAAATTGAACTTGATTTAATTTC 98
|||||||.|.|| ||| ||..|||.|||||||||||.|||...||.||
BPUM_1458___s 51 ATATGATCTCAGCACGG--TTGCAAAGGAAATTGAACTAGATGCTATCTC 98
BSNT_02567___ 99 TTTCGCGGATTTGGAATTGATCGGTATCGGTGCATACAGCCCGATTGAAG 148
|||.||.||..|.|||.|.||.|..||.||||..||.|||||.|||||||
BPUM_1458___s 99 TTTTGCAGACCTTGAACTCATAGCAATTGGTGGGTATAGCCCAATTGAAG 148
BSNT_02567___ 149 GTTTCTTTAATGAAAAA---GATTACGTATCTGTAGTCGAAAACATGCGT 195
|.|| ||||| .|||| |||||.|.|.||||.|||...|..|||||.
BPUM_1458___s 149 GGTT-TTTAA--CAAAAGCTGATTATGAAGCTGTTGTCAGCAGTATGCGG 195
BSNT_02567___ 196 CTTTCTTCCGGCGTTGTCTGGTCTCTTCCAATCACGCTTCCGGTCGATGC 245
||..|....||.||.||.|||||||||||.||.||.||.||.|| || |
BPUM_1458___s 196 CTAGCAAGTGGTGTCGTTTGGTCTCTTCCTATTACACTGCCAGT-GA--C 242
BSNT_02567___ 246 ---GCAAAAAGCAGCGGAA--CTGTCACTTGGTGAAACGGTAAAGT---- 286
|.||||.||||||||| |..||| .||||| ||..||
BPUM_1458___s 243 AAAGGAAAAGGCAGCGGAAATCCATCA--AGGTGA-----TATTGTGCGT 285
BSNT_02567___ 287 -TAACGTATGAAGGAGAAAC---ATACGGCGTTATCCAAATCGAAGACCT 332
||.|||||.|.|| ||| |||.|||||.||..||.|.||.||.|.
BPUM_1458___s 286 CTATCGTATAATGG---AACTGTATATGGCGTGATTGAAGTAGAGGATCA 332
BSNT_02567___ 333 GTACGTGCCTGACAAACAAAAAGAAGCTGTCAATGTGTACAAAACAGATG 382
.|||...|||||.||..||||||||||.||.||||||||.|||||.||||
BPUM_1458___s 333 ATACACACCTGATAAGGAAAAAGAAGCGGTGAATGTGTATAAAACTGATG 382
BSNT_02567___ 383 AACAGGAGCATCCTGGTGTTAAAAAGCTGTTCAGCCGCGGCAATACATAT 432
|.|...|.|||||.|||||.|||||..|.||....|||||..|.||.||.
BPUM_1458___s 383 ACCGCAATCATCCAGGTGTGAAAAAATTATTTGAACGCGGTGACACTTAC 432
BSNT_02567___ 433 GTCGGCGGGCCGATTACGTTGATTAAAAAAGCTTC--AAAACAGTTCCCT 480
.|.||.||....|||||..||| ..|||.||..| |||||..||||||
BPUM_1458___s 433 ATTGGTGGTAAAATTACACTGA--CGAAACGCAGCGAAAAACCATTCCCT 480
BSNT_02567___ 481 GAATTTACATTTGAACCGTTAGAAACGAGACGCCAGTTTGCGGAAAAAGG 530
.|||||||.|.|||.|||..||||||.|||||.||.|||..|||.||.||
BPUM_1458___s 481 CAATTTACGTATGAGCCGGAAGAAACAAGACGTCATTTTAAGGAGAACGG 530
BSNT_02567___ 531 CTGGGAAACCATTGTCGGTTTCCAAACAAGAAACCCTGTTCACAGAGCGC 580
||||.||||||||||.|||||||||||.|||||||||||||||.|.||.|
BPUM_1458___s 531 CTGGAAAACCATTGTTGGTTTCCAAACGAGAAACCCTGTTCACCGTGCCC 580
BSNT_02567___ 581 ATGAATACATTCAAAAAACGGCTCTTGAAACAGTAGACGGCTTGTTCTTG 630
|||||||.||||||||.||.||.||||||||.||.||.||.|||||.||.
BPUM_1458___s 581 ATGAATATATTCAAAAGACAGCACTTGAAACCGTCGATGGTTTGTTTTTA 630
BSNT_02567___ 631 AATCCGTTAGTAGGTGAAACAAAATCTGATGACATTCCAGCTGATGTACG 680
|||||..|.||.||.|||||||||||.||.||.|||||.||.|||||..|
BPUM_1458___s 631 AATCCACTTGTCGGCGAAACAAAATCAGACGATATTCCGGCAGATGTGAG 680
BSNT_02567___ 681 GATGGAAAGCTACCAAGTGCTTCTTGATC-ATTATTACCCGAAAGATCGC 729
.|||.||||.||.|||||| ||.||||.| .|||||||||.|||||||||
BPUM_1458___s 681 AATGAAAAGTTATCAAGTG-TTATTGAACGGTTATTACCCAAAAGATCGC 729
BSNT_02567___ 730 GTTTTCCTTGGTGTCTTTTTAGCGGCGATGCGTTATGCAGGCCCGAGAGA 779
||.||..|.|||||.|||...|||||.|||||||||||.||.||.|..||
BPUM_1458___s 730 GTCTTTTTAGGTGTTTTTCCTGCGGCAATGCGTTATGCTGGACCAAAGGA 779
BSNT_02567___ 780 AGCAATTTTCCACGCGCTTGTCAGAAAGAACTACGGCTGCACACATTTCA 829
||||||.||.|||||.|||||..|.||.||.||.|||||.||.||.||.|
BPUM_1458___s 780 AGCAATCTTTCACGCACTTGTTCGTAAAAATTATGGCTGTACTCACTTTA 829
BSNT_02567___ 830 TCGTCGGCCGTGATCATGCAGGTGTAGGCGACTATTACGGAACATACGAA 879
|.||.||..|.||||||||||||||.||.||.||||||||.||||||||.
BPUM_1458___s 830 TTGTGGGAAGAGATCATGCAGGTGTTGGTGATTATTACGGCACATACGAG 879
BSNT_02567___ 880 GCACAGGAGCTGTTTGACAC-ATTTA-AACCTGAAGAACTCGGAATTACA 927
||.||||||.|.||||| || ||||| ||.| ||||||.|.||.|||||.
BPUM_1458___s 880 GCGCAGGAGTTATTTGA-ACAATTTACAAGC-GAAGAAATTGGCATTACC 927
BSNT_02567___ 928 CCGCTGAAATTTGAGCACAGCTTCTTCTGTAAAAAATGCGGAAATATGGG 977
|||.|.||||||||.||.|||||||.||||||.|.|||.|.|...||||.
BPUM_1458___s 928 CCGTTAAAATTTGAACATAGCTTCTACTGTAATACATGTGAAGCAATGGC 977
BSNT_02567___ 978 AACAGCGAAAACTTGCCCTC---ATGGCAGAGAGCATCACGTCATTTTAT 1024
||||.|.|||||.||.|||| ||...||.|||||| ||||||.|.|
BPUM_1458___s 978 AACACCAAAAACATGTCCTCACGATAAAAGCGAGCAT---GTCATTCTTT 1024
BSNT_02567___ 1025 CAGGCACTAAGGTAAGAGGTATGCTGAGAGACGGTGTGCTGCCGCCTGCT 1074
||||.||.|||||..||...|||||.|||.||||.|...|.||.||
BPUM_1458___s 1025 CAGGTACAAAGGTTCGAACGATGCTAAGAAACGGAGAATTACCACC---- 1070
BSNT_02567___ 1075 GAA-----TTCAGTCGAAAAGAAGTAGTAGAAGTGTTAATCAAAGGGATG 1119
|| |||||.|||||||||||..|.|||...||||||.||| |
BPUM_1458___s 1071 -AAGCACGTTCAGCCGAAAAGAAGTCATTGAAACATTAATCGAAG----G 1115
BSNT_02567___ 1120 AAGAAAAAAGAAGAAGTAGGCGTATCTTAA 1149
|..|||||.||.| |||||||||
BPUM_1458___s 1116 ATTAAAAACGACG--------GTATCTTAA 1137
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.