Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02595 and BPUM_1479
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:09
# Commandline: needle
# -asequence dna-align/BSNT_02595___yloS.1.24716.seq
# -bsequence dna-align/BPUM_1479___yloS.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02595___yloS-BPUM_1479___yloS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02595___yloS-BPUM_1479___yloS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02595___yloS
# 2: BPUM_1479___yloS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 688
# Identity: 464/688 (67.4%)
# Similarity: 464/688 (67.4%)
# Gaps: 86/688 (12.5%)
# Score: 1459.0
#
#
#=======================================
BSNT_02595___ 1 ATGAAAACA-ATTAATATCGTTGCGGGAGGCCC----GAAAAATCTCATT 45
||| || ||..||||||||||.||.||.|| |||.| || |
BPUM_1479___y 1 ATG----CACATACATATCGTTGCCGGCGGTCCTTTTGAATA----CA-T 41
BSNT_02595___ 46 CCCGATCTAACCGGCTATACGGATGAA----CACACG--------CTTTG 83
|||| ||...|..||| |||| ||||.| ||.||
BPUM_1479___y 42 CCCG------CCACTTGAACG--TGAAGCATCACAAGAGGATGTTCTCTG 83
BSNT_02595___ 84 GATCGGTGTTGACAAAGGCACCGT--CACTCTCT------TAGATGCCGG 125
|||.||.||.| ||||| .||||||| ||||...|||
BPUM_1479___y 84 GATTGGCGTAG--------ACCGTGGAACTCTCTTCTTACTAGAACACGG 125
BSNT_02595___ 126 GATCATTCCTGTTGAAGCCTTCGGAGATTTTGACAGCATAACGGAGCAAG 175
|||.|..||||...|||||||.||.|||||||||||..|.||.||..|||
BPUM_1479___y 126 GATTACCCCTGCCAAAGCCTTTGGTGATTTTGACAGTGTGACAGAAGAAG 175
BSNT_02595___ 176 AACGCCG---GCGAATAGAAAAAGCCGCT--CCCGCCCTTCATGTGTATC 220
|.|..|| ||.||.||||||| | ||.|||||..||||.|.||
BPUM_1479___y 176 AGCTTCGGGAGCTAAAAGAAAAA-----TTGCCTGCCCTGAATGTCTTTC 220
BSNT_02595___ 221 AAGCAGAAAAAGATCAAACAGATTTAGACCTCGCCCTTGATTGGGCGCTG 270
||||.|||||.|||.||||.||||||||.||.||.||..|.|||||.|||
BPUM_1479___y 221 AAGCTGAAAAGGATGAAACCGATTTAGAGCTTGCGCTGAACTGGGCACTG 270
BSNT_02595___ 271 GAAAAGCAGCC-GGATATTATTCAGATTTTCGGCATTACAGGCGGCAGAG 319
....||||.|| |.|.| ||||.|.||||.|||.||||||||.||.||.|
BPUM_1479___y 271 AGTCAGCACCCAGCACA-TATTGACATTTACGGTATTACAGGAGGAAGGG 319
BSNT_02595___ 320 CTGATCATTTTTTAGGAAACATTCAGCTACTGTATAGAGGTG--TAAAAA 367
|.|||||||||.|||||||.||.||.||.||.||||.||| | |.|..|
BPUM_1479___y 320 CGGATCATTTTCTAGGAAATATCCATCTTCTATATAAAGG-GATTCAGCA 368
BSNT_02595___ 368 CGAACATAAAAATTAGGCTGATAGACAAACAAAATCAT-ATTCAAATGTT 416
|.|.|| .||.||.|..||..|||||||||||||| || |||||||||||
BPUM_1479___y 369 CAAGCA-GAATATCACCCTTGTAGACAAACAAAAT-ATCATTCAAATGTT 416
BSNT_02595___ 417 CCCTCCTGGTGAATATGATATTGAGAAG--GATGAAAATAAGCGATATAT 464
....||||||..|||.||.|| |.||| |||.||.||||....|||.|
BPUM_1479___y 417 TGAACCTGGTACATACGAAAT--AAAAGAAGATCAAGATAAAAAGTATGT 464
BSNT_02595___ 465 CTCCTTCATACCGTTTTCCGAAGACATACATG------AGCTGACCCTGA 508
.||.||..||||.||| |..|.||.|| |||||||..|.|
BPUM_1479___y 465 ATCGTTTCTACCCTTT------GGGACACCTGTTGAAAAGCTGACATTAA 508
BSNT_02595___ 509 CCGGTTTTAAATATCCTCTAAATAATTGTCATATTACGCTCGGTTCAACA 558
..|||||.|||||||||||.||.||||||||||||..||..|||||.|||
BPUM_1479___y 509 AAGGTTTCAAATATCCTCTGAAAAATTGTCATATTGAGCCTGGTTCCACA 558
BSNT_02595___ 559 CTATGTATTAGTAACGAACTCATTCATTCACGAGGTACTTTTTCGTTTGC 608
|||||||||||||||||||||||.||.|||...||||||||||| |||.|
BPUM_1479___y 559 CTATGTATTAGTAACGAACTCATCCACTCAAATGGTACTTTTTC-TTTTC 607
BSNT_02595___ 609 A-AAAGGCATATTAATAATGATAAGAAGCACGGATTAA 645
| .|||||||||||||||||.|||||||||..||||.|
BPUM_1479___y 608 ATGAAGGCATATTAATAATGGTAAGAAGCAAAGATTGA 645
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