Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02600 and BPUM_1484
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:10
# Commandline: needle
# -asequence dna-align/BSNT_02600___sdaAB.1.24716.seq
# -bsequence dna-align/BPUM_1484___sdaAB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02600___sdaAB-BPUM_1484___sdaAB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02600___sdaAB-BPUM_1484___sdaAB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02600___sdaAB
# 2: BPUM_1484___sdaAB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 691
# Identity: 498/691 (72.1%)
# Similarity: 498/691 (72.1%)
# Gaps: 56/691 ( 8.1%)
# Score: 1809.5
#
#
#=======================================
BSNT_02600___ 1 ATGAAATACAGAAGCGTTTTTGATATTATCGGCCCGGTTATGATCGGTCC 50
|||||||..|||||.||.|||||||||||.||.||.||.|||||.|||||
BPUM_1484___s 1 ATGAAATTTAGAAGTGTGTTTGATATTATTGGACCCGTCATGATTGGTCC 50
BSNT_02600___ 51 GTCCAGCTCTCATACAGCGGGAGCTGCTAGAATCGGGAGAGTGGCCAGAA 100
.||.||.||.|||||||||||.||.|||.||||.||.||||||||..|.|
BPUM_1484___s 51 ATCAAGTTCGCATACAGCGGGTGCAGCTCGAATAGGAAGAGTGGCTCGCA 100
BSNT_02600___ 101 GTTTATTTGGCAGAGAGCCTGAGCGCATCATTGTATCTTTTTACGGCTCG 150
|||||||.||.||||||||..|.||.||..|.||.||.|||||.|||||.
BPUM_1484___s 101 GTTTATTCGGAAGAGAGCCGAAACGAATTGTCGTTTCATTTTATGGCTCT 150
BSNT_02600___ 151 TTTGCGGAAACGTATAAGGGCCACGGCACAGATGTCGCGATTATCGGCGG 200
|||...||.||||||||.||.|||||.|||||||||||.|||||||||||
BPUM_1484___s 151 TTTAAAGATACGTATAAAGGACACGGTACAGATGTCGCCATTATCGGCGG 200
BSNT_02600___ 201 ATTGCTTGATTTTGATACATTCGATGAACGGATTAAAACCGCTATACAAA 250
..|.|||||.|||||||||||.||||||||.||.|||||.||.||..|.|
BPUM_1484___s 201 CGTTCTTGACTTTGATACATTTGATGAACGCATCAAAACAGCGATCGATA 250
BSNT_02600___ 251 TTGC-AGAAGCTAAAGGAATTGATATAGAGTTTCGGGTAGAAGACGCAGT 299
|||| |.|||| |||||.||.||.||.||.|||...|.||||||.|||||
BPUM_1484___s 251 TTGCAAAAAGC-AAAGGGATCGACATTGAATTTAAAGAAGAAGATGCAGT 299
BSNT_02600___ 300 CCCGGTCCATCCGAACACAACAAAAATCACCATTTCTGATGAAAAGGGTG 349
.||.|..||.|||||.|||.|||||.|....||.||.||||.|||
BPUM_1484___s 300 GCCAGCGCACCCGAATACAGCAAAAGTAGAGATATCAGATGCAAA----- 344
BSNT_02600___ 350 AGCTGGAAC---TGA------CGGGTATTTCGATTGGCGGAGGAAAGATT 390
|||||| ||| |||| |||||.||.|||||.||.||.|||
BPUM_1484___s 345 ---TGGAACCCTTGAATTAATCGGG-ATTTCCATCGGCGGTGGTAAAATT 390
BSNT_02600___ 391 GAAATCACAGAATTGAATGGTTTTGAGCTCCGGCTGTCAGGAAATCATCC 440
|||||.||.|||||||||||.|||||||||.|.||.||||||||||||||
BPUM_1484___s 391 GAAATTACTGAATTGAATGGCTTTGAGCTCAGACTTTCAGGAAATCATCC 440
BSNT_02600___ 441 GGCCATATTAGTTGTTCATAATGACAAGTTTGGCACAATTGCCGGTGTTG 490
.|||||..|.||.||||||||.||....|.||||||.|||||.|..||.|
BPUM_1484___s 441 TGCCATTCTTGTGGTTCATAACGATCGCTATGGCACGATTGCAGCAGTCG 490
BSNT_02600___ 491 CCAATGTTCTGGCGAAATTTTCAATCAACGTAGGACATATGGAAGTAGCC 540
|.||.||..|.|||||||||.|.||||||.|.||.|||||||||||.||.
BPUM_1484___s 491 CTAACGTGTTAGCGAAATTTGCCATCAACATCGGTCATATGGAAGTGGCG 540
BSNT_02600___ 541 CGGAAAGATATCGGCCA----GCTTGCGCTGATGACAATAGAGGTCGACC 586
||.||||||.||||.|| ||| ||||||||.||.||.||.||.|
BPUM_1484___s 541 CGTAAAGATGTCGGGCAAGAGGCT----CTGATGACCATTGAAGTGGATC 586
BSNT_02600___ 587 AAAATATTGACGACCACATTCTCGACGAGCTGTC------------GAA- 623
||||||||||| |.||||||| |||
BPUM_1484___s 587 AAAATATTGAC--------------CCAGCTGTCTTATTGGAGCTTGAAA 622
BSNT_02600___ 624 -GCTGCCGAATATTATTCAAGTGACAAAGATTGCTGACTAG 663
.|||||.||.|||||||||||.|||.|.|||||.||.||.
BPUM_1484___s 623 CACTGCCAAACATTATTCAAGTCACACAAATTGCAGAGTAA 663
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