Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_02614 and BPUM_1496

See Amino acid alignment / Visit BSNT_02614 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:12
# Commandline: needle
#    -asequence dna-align/BSNT_02614___ffh.1.24716.seq
#    -bsequence dna-align/BPUM_1496___ffh.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02614___ffh-BPUM_1496___ffh.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02614___ffh-BPUM_1496___ffh.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02614___ffh
# 2: BPUM_1496___ffh
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1348
# Identity:    1101/1348 (81.7%)
# Similarity:  1101/1348 (81.7%)
# Gaps:          14/1348 ( 1.0%)
# Score: 4528.0
# 
#
#=======================================

BSNT_02614___      1 ATGGCATTTGAAGGATTAGCCGACCGACTGCAGCAGACGATTTCTAAAAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BPUM_1496___f      1 ATGGCATTTGAAGGATTAGCCGACCGACTGCAGCAGACGATTTCAAAAAT     50

BSNT_02614___     51 CCGCGGAAAAGGGAAA--GTCAGCGAACAAGATGTAAAAGATATGATGCG     98
                     ||||||.|||||.|||  ||||  |||||||||||||||||.||||||||
BPUM_1496___f     51 CCGCGGCAAAGGAAAAGTGTCA--GAACAAGATGTAAAAGAAATGATGCG     98

BSNT_02614___     99 TGAGGTTCGCCTTGCGCTGCTTGAGGCTGACGTTAACTTTAAAGTAGTCA    148
                     .||||||||||||||.||.|||||.||||||||.||.|||||||||||||
BPUM_1496___f     99 CGAGGTTCGCCTTGCCCTTCTTGAAGCTGACGTCAATTTTAAAGTAGTCA    148

BSNT_02614___    149 AAGATTTTGTCAAAAAAGTAAGTGAACGCGCTGTAGGCCAAGACGTCATG    198
                     ||||.|||||.||||||||||||||.||.||.||.||.|||||.||||||
BPUM_1496___f    149 AAGACTTTGTGAAAAAAGTAAGTGAGCGGGCAGTTGGACAAGAGGTCATG    198

BSNT_02614___    199 AAAAGTCTGACGCCCGGCCAGCAGGTCATTAAAGTTGTTCAAGAGGAACT    248
                     |||||.||.||.||.||.||.|||||||||||||||||..||||.||.||
BPUM_1496___f    199 AAAAGCCTTACCCCTGGACAACAGGTCATTAAAGTTGTAAAAGAAGAGCT    248

BSNT_02614___    249 GACTGAGCTGATGGGCGGCGAAGAGAGCAAAATCGCCGTCGCAAAAAGGC    298
                     .|||.|..|.||||||||.||||||||.||||||||.||.||.||||...
BPUM_1496___f    249 CACTCAATTAATGGGCGGAGAAGAGAGTAAAATCGCTGTAGCGAAAAAAT    298

BSNT_02614___    299 CGCCGACTGTTATTATGATGGTCGGTCTCCAAGGTGCCGGTAAAACGACA    348
                     |.|||||.||.|||||||||||.|||||.|||||.||.||||||||.||.
BPUM_1496___f    299 CTCCGACGGTCATTATGATGGTTGGTCTTCAAGGGGCAGGTAAAACCACC    348

BSNT_02614___    349 ACAAGCGGTAAGCTTGCGAATCTGCTGCGCAAAAAGCATAATCGCAAACC    398
                     ||||..||.||||||||.|||.|.||.||||||||.||||||||.|||||
BPUM_1496___f    349 ACAACTGGGAAGCTTGCTAATTTACTTCGCAAAAAACATAATCGTAAACC    398

BSNT_02614___    399 GATGCTGGTTGCTGCCGATATTTACCGCCCAGCCGCAATTAAGCAGCTGG    448
                     ||||.||||.|||||.|||||||||.|.|||||.||.||..|||||||..
BPUM_1496___f    399 GATGATGGTGGCTGCAGATATTTACAGACCAGCAGCGATCCAGCAGCTTC    448

BSNT_02614___    449 AAACACTCGGCAAACAGCTTGATATGCCTGTTTTCTCTCTTGGCGATCAG    498
                     ||||.||.||.||||||||||||||||||||.||.||..|.||.|||||.
BPUM_1496___f    449 AAACGCTAGGGAAACAGCTTGATATGCCTGTGTTTTCATTAGGTGATCAA    498

BSNT_02614___    499 GTCAGTCCTGTAGAAATAGCTAAACAGGCTATTGAGAAAGCCAAGGAAGA    548
                     |||||||||||.||.||.||.||||||||.||.||.|||||.||.|||||
BPUM_1496___f    499 GTCAGTCCTGTCGAGATTGCCAAACAGGCAATCGAAAAAGCGAAAGAAGA    548

BSNT_02614___    549 ACATTATGACTACGTCATTTTGGATACGGCAGGGCGCTTGCATATCGACC    598
                     .||..||||.||.||||||||.|||||.|||||.|||.|.|||||.||..
BPUM_1496___f    549 GCACCATGATTATGTCATTTTAGATACAGCAGGACGCCTTCATATTGATG    598

BSNT_02614___    599 ATGAACTGATGGATGAACTGACCAACGTCAAAGAAATCGCGAATCCGGAA    648
                     |.|||.|||||||||||||....||.||.||||||.|.||||||||.|||
BPUM_1496___f    599 AAGAATTGATGGATGAACTTCAGAAAGTAAAAGAAGTAGCGAATCCAGAA    648

BSNT_02614___    649 GAAATTTTCCTGGTTGTCGATTCAATGACCGGTCAGGACGCTGTGAATGT    698
                     |||||||||||.|||||.||.||.|||||.|||||.||.|||||.|||||
BPUM_1496___f    649 GAAATTTTCCTTGTTGTTGACTCTATGACAGGTCAAGATGCTGTCAATGT    698

BSNT_02614___    699 TGCCAAAAGCTTTAATGAACAGCTCGGTTTAACCGGTGTTGTGTTAACTA    748
                     .||.||||||||||||||||||||.||||||||.||||||||..||||.|
BPUM_1496___f    699 AGCGAAAAGCTTTAATGAACAGCTTGGTTTAACAGGTGTTGTTCTAACGA    748

BSNT_02614___    749 AGCTGGATGGAGACACACGCGGCGGGGCTGCGCTTTCTATTCGCGCTGTT    798
                     |.||.||.||.||.|||||.|||||.||.||.|||||.|||||.|||||.
BPUM_1496___f    749 AACTAGACGGGGATACACGAGGCGGTGCAGCACTTTCCATTCGAGCTGTC    798

BSNT_02614___    799 ACAAACACGCCAATTAAGTTCGCAGGTTTGGGCGAAAAGCTTGATGCGTT    848
                     ||.||.|||||.|||||.|||||.|...|.||.|||||||||||.|||.|
BPUM_1496___f    799 ACCAATACGCCGATTAAATTCGCCGCGCTAGGTGAAAAGCTTGACGCGAT    848

BSNT_02614___    849 AGAGCCGTTCCATCCTGAACGCATGGCATCAAGGATTCTCGGCATGGGCG    898
                     .||.||.|||||.||.|||||.|||||||||||.|||||.||||||||.|
BPUM_1496___f    849 TGAACCATTCCACCCAGAACGGATGGCATCAAGAATTCTTGGCATGGGAG    898

BSNT_02614___    899 ACGTGCTGACATTGATTGAAAAAGCACAGGCCAGCGTTGATGAAGACAAA    948
                     |.|||||.|||.|||||||||||||||||||.|.|||.||..||||.|||
BPUM_1496___f    899 ATGTGCTTACACTGATTGAAAAAGCACAGGCAAACGTGGACCAAGATAAA    948

BSNT_02614___    949 GCCAAAGAGCTGGAACAAAAAATGAGAACGATGAGCTTCACATTGGACGA    998
                     ||.||||||||.||||||||||||.|.||.||||||||.|||.|.||.||
BPUM_1496___f    949 GCGAAAGAGCTTGAACAAAAAATGCGGACCATGAGCTTTACACTCGATGA    998

BSNT_02614___    999 TTTTCTGGAGCAGCTCGGGCAAGTCAGAAACATGGGGCCGCTTGATGAGC   1048
                     |||.||.||||||||.||.|||||..|.||||||||.||.||||||||..
BPUM_1496___f    999 TTTCCTCGAGCAGCTTGGCCAAGTTCGTAACATGGGTCCACTTGATGAAT   1048

BSNT_02614___   1049 TTCTGCAAATGATGCCGGGTGCAGGTAAAATGAAAGGCCTGAAAAACATC   1098
                     |..|.||||||||||||||.||.|||||||||||.||.||.||||||.||
BPUM_1496___f   1049 TGATCCAAATGATGCCGGGAGCCGGTAAAATGAAGGGGCTCAAAAACGTC   1098

BSNT_02614___   1099 CAAGTTGATGAAAAACAGCTGAATCATGTGGAAGCAATCATTAAATCAAT   1148
                     |||||.||.|||||.|||||.|||||..|.|||||.||||||||||||||
BPUM_1496___f   1099 CAAGTAGACGAAAAGCAGCTCAATCACATCGAAGCGATCATTAAATCAAT   1148

BSNT_02614___   1149 GAC-----TGTTCTTGAAAAAGAACAGCCGGATATCATCAATGCCAGCCG   1193
                     |||     .|     ||||||||||||||.||..||||||||||.|||||
BPUM_1496___f   1149 GACGACCGAG-----GAAAAAGAACAGCCAGAGGTCATCAATGCAAGCCG   1193

BSNT_02614___   1194 GCGGAAACGGATTGCAAAAGGAAGCGGGACATCCGTACAGGAAGTCAACC   1243
                     ..|.|||||||||||||||||||||||.|||||.||||||||||||||.|
BPUM_1496___f   1194 AAGAAAACGGATTGCAAAAGGAAGCGGAACATCTGTACAGGAAGTCAATC   1243

BSNT_02614___   1244 GTCTGCTTAAGCAGTTTGATGAAATGAAAAAAATGATGAAGCAGATGACA   1293
                     |.||..|.|||||.|||||.|||||||||||.|||||||||||.|||||.
BPUM_1496___f   1244 GCCTTTTAAAGCAATTTGACGAAATGAAAAAGATGATGAAGCAAATGACC   1293

BSNT_02614___   1294 AACATGTCAAAAGGCAAGAAAAAAGGGTTTAAGCTACCTTTTATGTAA   1341
                     ||||||||.|||||.|||||||||||.|||||..||||.|||||||||
BPUM_1496___f   1294 AACATGTCCAAAGGAAAGAAAAAAGGCTTTAAATTACCATTTATGTAA   1341


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.