Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02620 and BPUM_1502
See
Amino acid alignment /
Visit
BSNT_02620 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:12
# Commandline: needle
# -asequence dna-align/BSNT_02620___rplS.1.24716.seq
# -bsequence dna-align/BPUM_1502___rplS.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02620___rplS-BPUM_1502___rplS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02620___rplS-BPUM_1502___rplS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02620___rplS
# 2: BPUM_1502___rplS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 348
# Identity: 320/348 (92.0%)
# Similarity: 320/348 (92.0%)
# Gaps: 0/348 ( 0.0%)
# Score: 1488.0
#
#
#=======================================
BSNT_02620___ 1 ATGCAAAAACTAATTGAAGATATCACAAAAGAACAGCTTCGTACTGATCT 50
||||||.||.|.||||||||.||.|||||||||||..|.||.||||||||
BPUM_1502___r 1 ATGCAACAATTGATTGAAGAAATTACAAAAGAACAATTACGCACTGATCT 50
BSNT_02620___ 51 TCCTGCGTTCCGTCCTGGTGACACTTTACGTGTACACGTTAAAGTTGTTG 100
||||||||||||||||||||||||||||||||||||||||||||||||.|
BPUM_1502___r 51 TCCTGCGTTCCGTCCTGGTGACACTTTACGTGTACACGTTAAAGTTGTCG 100
BSNT_02620___ 101 AGGGTAACCGTGAGCGTATCCAGATCTTTGAAGGTGTTGTGATTAAGCGT 150
||||||..||||||||||||||||||||||||||||||||.|||||||||
BPUM_1502___r 101 AGGGTACTCGTGAGCGTATCCAGATCTTTGAAGGTGTTGTAATTAAGCGT 150
BSNT_02620___ 151 CGTGGTGGTGGAATCAGCGAAACGTTCACAGTTCGTAAGATTTCTTACGG 200
|||||||||||||||||||||||.||||||||||||||||||||||||||
BPUM_1502___r 151 CGTGGTGGTGGAATCAGCGAAACTTTCACAGTTCGTAAGATTTCTTACGG 200
BSNT_02620___ 201 TGTTGGCGTTGAACGTACTTTCCCAGTACACACACCAAAAATCGCGAAAA 250
|||.||||||||.|||||.|||||.||||||||||||||||||||.||.|
BPUM_1502___r 201 TGTAGGCGTTGAGCGTACATTCCCTGTACACACACCAAAAATCGCTAACA 250
BSNT_02620___ 251 TCGAAGTTGTACGTTACGGTAAAGTACGCCGTGCTAAACTTTACTACCTG 300
||||||||||||||.|||||||.|||||.|||||.||||||||||||||.
BPUM_1502___r 251 TCGAAGTTGTACGTCACGGTAAGGTACGTCGTGCGAAACTTTACTACCTA 300
BSNT_02620___ 301 CGTGAACTTCGCGGAAAAGCGGCTCGTATTAAAGAGATCAGACGATAA 348
||||||||||||||.||||||||||||||.|||||.||||||||||||
BPUM_1502___r 301 CGTGAACTTCGCGGTAAAGCGGCTCGTATCAAAGAAATCAGACGATAA 348
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.