Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02637 and BPUM_1515
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:14
# Commandline: needle
# -asequence dna-align/BSNT_02637___codY.1.24716.seq
# -bsequence dna-align/BPUM_1515___codY.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02637___codY-BPUM_1515___codY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02637___codY-BPUM_1515___codY.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02637___codY
# 2: BPUM_1515___codY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 781
# Identity: 632/781 (80.9%)
# Similarity: 632/781 (80.9%)
# Gaps: 2/781 ( 0.3%)
# Score: 2552.0
#
#
#=======================================
BSNT_02637___ 1 ATGGCTTTATTACAAAAAACAAGAATTATTAACTCCATGCTGCAAGCTGC 50
|||||.|||.|||||||||||||.|||||||||||.||||||||||.|||
BPUM_1515___c 1 ATGGCGTTACTACAAAAAACAAGGATTATTAACTCAATGCTGCAAGATGC 50
BSNT_02637___ 51 GGCAGGGAAACCGGTAAACTTCAAGGAAATGGCGGAGACGCTGCGGGATG 100
.||.||||||||.||.||.||.|||||||||||.||.|||.||.|.||||
BPUM_1515___c 51 AGCGGGGAAACCAGTTAATTTTAAGGAAATGGCAGAAACGTTGAGAGATG 100
BSNT_02637___ 101 TAATTGATTCCAATATTTTCGTTGTAAGCCGCAGAGGGAAACTCCTTGGG 150
|.||||||||.||.||||||||..|||||.|.||||||||.||.||.||.
BPUM_1515___c 101 TCATTGATTCAAACATTTTCGTATTAAGCAGAAGAGGGAAGCTTCTAGGC 150
BSNT_02637___ 151 TATTCTATTAACCAGCAAATTGAAAATGATCGTATGAAAAAAATGCTTGA 200
||.||.||.||||||||.|||||||||...||||||||.|||||||||||
BPUM_1515___c 151 TACTCGATCAACCAGCAGATTGAAAATCCGCGTATGAAGAAAATGCTTGA 200
BSNT_02637___ 201 GGATCGTCAATTCCCTGAAGAATATACGAAAAATCTGTTTAATGTCCCTG 250
.||.|||||.|||||||||||||||||.||.|.|||.||.||..||||||
BPUM_1515___c 201 AGACCGTCAGTTCCCTGAAGAATATACAAAGAGTCTATTCAACATCCCTG 250
BSNT_02637___ 251 AAACATCTTCTAACTTGGATATTAATAGTGAATATACTGCTTTCCCTGTT 300
||||||||||.|||.|.||.|||||.|||||.|||||.||||||||..||
BPUM_1515___c 251 AAACATCTTCAAACCTTGACATTAACAGTGAGTATACAGCTTTCCCGATT 300
BSNT_02637___ 301 GAGAACAGAGACCTGTTTCAAGCTGGTTTAACAACAATTGTGCCGATCAT 350
||||||.|.||..|.|||.||.|.|||||.|||||.||||||||.||.||
BPUM_1515___c 301 GAGAACCGTGATTTATTTGAATCAGGTTTGACAACGATTGTGCCAATTAT 350
BSNT_02637___ 351 CGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATC 400
||||||.||.||..|.||||||||..|.|||||.||.|||||.||||||.
BPUM_1515___c 351 CGGAGGAGGAGATCGTTTAGGAACGTTAATTCTGTCTCGTTTGCAAGATA 400
BSNT_02637___ 401 AATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCAACAGTTGTC 450
.|||.||.||||||||.||||||||.|||||||||||.|||||||||||.
BPUM_1515___c 401 CATTTAAAGACGATGATTTAATTCTTGCTGAATACGGAGCAACAGTTGTT 450
BSNT_02637___ 451 GGAATGGAAATCCTAAGAGAAAAAGCAGAAGAAATTGAAGAGGAAGCAAG 500
||||||||||||||..|.||.||||||||.|||||.|||||.||||||||
BPUM_1515___c 451 GGAATGGAAATCCTTCGTGAGAAAGCAGAGGAAATCGAAGAAGAAGCAAG 500
BSNT_02637___ 501 AAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGC 550
|||.||||||||.||.||||||||.||.||.||.||.||.||.|||||||
BPUM_1515___c 501 AAGTAAAGCTGTTGTCCAAATGGCAATTAGTTCTCTATCATATAGTGAGC 550
BSNT_02637___ 551 TTGAAGCAATTGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTT 600
|||||||.|||||.|||||.|||||.||.|||||.||.||.|||||.|||
BPUM_1515___c 551 TTGAAGCCATTGAACACATCTTTGAAGAACTTGATGGCAACGAAGGGCTT 600
BSNT_02637___ 601 CTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCCGTTCTGTTAT 650
||.||.|||||||||||||||||||||||.||.||.||.|||||.||.||
BPUM_1515___c 601 CTAGTGGCAAGTAAAATTGCTGACCGTGTAGGAATCACTCGTTCAGTGAT 650
BSNT_02637___ 651 TGTGAACGCACTCA-GAAAGCTGGAGAGCGCCGGTGTTATCGAGTCTAGA 699
.|||||||| ||.| |.|||.|.||.||.||.||.||.|||||.||..|.
BPUM_1515___c 651 CGTGAACGC-CTTACGTAAGTTAGAAAGTGCTGGCGTCATCGAATCACGC 699
BSNT_02637___ 700 TCATTAGGAATGAAAGGTACTTATATCAAGGTACTAAACAACAAATTCTT 749
||..|.||||||||.||.||.||||||||.||..|||||||||||||.||
BPUM_1515___c 700 TCTCTTGGAATGAAGGGAACATATATCAAAGTGTTAAACAACAAATTTTT 749
BSNT_02637___ 750 AATTGAATTAGAAAATCTAAAATCTCATTAA 780
|||.|||.|.||||||.||||||||||||||
BPUM_1515___c 750 AATCGAACTTGAAAATTTAAAATCTCATTAA 780
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