Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02641 and BPUM_1517
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:14
# Commandline: needle
# -asequence dna-align/BSNT_02641___flgC.1.24716.seq
# -bsequence dna-align/BPUM_1517___flgC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02641___flgC-BPUM_1517___flgC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02641___flgC-BPUM_1517___flgC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02641___flgC
# 2: BPUM_1517___flgC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 465
# Identity: 335/465 (72.0%)
# Similarity: 335/465 (72.0%)
# Gaps: 24/465 ( 5.2%)
# Score: 1163.0
#
#
#=======================================
BSNT_02641___ 1 ATGAC-AGCTTTTCATAGCTTAAATGTTTCAGCATCGGCTTTAACAGCTC 49
|||.| |..|||||| .||.|.||.|.||||||.||.||..|||||||.|
BPUM_1517___f 1 ATGTCAATTTTTTCA-GGCGTTAACGCTTCAGCCTCTGCACTAACAGCAC 49
BSNT_02641___ 50 AGCGAGTCAGAATGGACGTTGTATCATCTAACTTAGCAAATATGGATACG 99
||.|..|||||||||||||||||||.||||||.|.||||||||||||||.
BPUM_1517___f 50 AGAGGCTCAGAATGGACGTTGTATCCTCTAACCTTGCAAATATGGATACA 99
BSNT_02641___ 100 ACAAGAGCTAAGCAGGTGAATGGAGAGTGGGTGCCTTACAGAAGAAAAAT 149
||||||||.||.|||||..||||..|.||||.||||||.|||.|.||..|
BPUM_1517___f 100 ACAAGAGCGAAACAGGTTGATGGCAACTGGGAGCCTTATAGACGTAAGCT 149
BSNT_02641___ 150 GGTCTCCCTTCAGTCAAAAGGTGAATCGTTCTCTTCCATTCTCAATTCTC 199
.|||.|..|.|||.|...|||||||||.||.||.||.||..|.||| ||
BPUM_1517___f 150 CGTCACATTACAGCCGTCAGGTGAATCATTTTCATCTATATTAAAT--TC 197
BSNT_02641___ 200 AA--ATGA--GCGGAAGCGGGAATGCTGGAAACGGTGTGAAGGTTTCAAA 245
|| |||| .|| |||||.||....||||||||.|||||.|...|.||
BPUM_1517___f 198 AAGCATGAATTCG--AGCGGTAAATTAGGAAACGGCGTGAAAGCAACGAA 245
BSNT_02641___ 246 AATTACGGAGGATG-------ATTCGGATTTTAATCTTGTCTATGATCCG 288
.|||||.||.||.| |||| ||.|||...||||||||.
BPUM_1517___f 246 GATTACAGAAGACGAAACTCCATTC-------AACCTTCAATATGATCCT 288
BSNT_02641___ 289 ACAGACCCTGATGCAAACGCTGATGGATATGTACAAAAGCCTAATGTTGA 338
|||.|.||.|||||.||.|...||||||||||.||||..|||||||||||
BPUM_1517___f 289 ACAAATCCCGATGCCAATGAAAATGGATATGTTCAAACACCTAATGTTGA 338
BSNT_02641___ 339 TCCATTAAAGGAAATGGTTGATCTTGTCAGCAGCACCAGATCATATGAGG 388
|||||||||||||||||||||.||..||||||||.|.||.||||||||.|
BPUM_1517___f 339 TCCATTAAAGGAAATGGTTGACCTCATCAGCAGCTCAAGGTCATATGAAG 388
BSNT_02641___ 389 CGAATGTCACGGCGATGAATGCCACAAAGGGAATGCTGATGAAGGCGTTA 438
|.||.||.||.||..|.|||||.|..||..|.|||.|||||||.||.|||
BPUM_1517___f 389 CAAACGTGACCGCACTAAATGCGAATAAAAGCATGTTGATGAAAGCTTTA 438
BSNT_02641___ 439 GAAATCGGAAAGTAG 453
|||||.||||||||.
BPUM_1517___f 439 GAAATAGGAAAGTAA 453
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