Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02659 and BPUM_1529
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:15
# Commandline: needle
# -asequence dna-align/BSNT_02659___fliL.1.24716.seq
# -bsequence dna-align/BPUM_1529___fliL.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02659___fliL-BPUM_1529___fliL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02659___fliL-BPUM_1529___fliL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02659___fliL
# 2: BPUM_1529___fliL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 466
# Identity: 299/466 (64.2%)
# Similarity: 299/466 (64.2%)
# Gaps: 80/466 (17.2%)
# Score: 907.5
#
#
#=======================================
BSNT_02659___ 1 ATGAAGAAAAAGTTAATGATCATATTACTAATTATTCTTATCGTAATTGG 50
||||||||.||.|||.|..|..||.|.|||||.||..||||.|..||.||
BPUM_1529___f 1 ATGAAGAAGAAATTAGTCGTAGTAATGCTAATCATGATTATTGCCATCGG 50
BSNT_02659___ 51 TGCTCTCGGGGC-GGCGGCTTATTT--------TGTTTTAGGCGGAAAGT 91
.|...|.||.|| |||..|.||||| ||.||.||.|| |||
BPUM_1529___f 51 CGGAATAGGAGCAGGCATCATATTTCTGCTGAATGGTTCAGACG--AAG- 97
BSNT_02659___ 92 CCGAAAAAAG-TGAAGCGAAA-----AAAAGTATTGATGAAATCGTTGCG 135
.||||| |||| ||| ||.||.| ||||||.||||...|
BPUM_1529___f 98 ----CAAAAGCTGAA---AAAGAGCCAACAGCA--GATGAAGTCGTAAAG 138
BSNT_02659___ 136 TCTTCTGTTGATGTAGAA-----GAGATCACAACAAATTTAAAGTCTGA- 179
.|||||||||| || |||||.|..||.||||||||||||||
BPUM_1529___f 139 GCTTCTGTTGA-----AATTCCTGAGATTATCACCAATTTAAAGTCTGAA 183
BSNT_02659___ 180 -TAACATTATCCG-----TCTTGCTATT-AAGCTTGAAACTGATTCTGAT 222
.|| ||.|| .|||| |||| ||..|||||||.||.|||||.
BPUM_1529___f 184 GGAA----ATGCGGTCAAACTTG-TATTGAATATTGAAACAGACTCTGAA 228
BSNT_02659___ 223 AAATCAAAAGAAGAACTTGAGAAACGTGATTTCCAAGTGAAAGACGCTG- 271
|||.||||||||||.|||||||||.|...|||.||||||||||||||.|
BPUM_1529___f 229 AAAGCAAAAGAAGAGCTTGAGAAAAGAAGTTTTCAAGTGAAAGACGCCGT 278
BSNT_02659___ 272 --------TTATATCACTGCTTGCTGATACGAATGCTGATCAGATTGAGG 313
||.||||| ||.||||||||.|||.|..||||.|
BPUM_1529___f 279 AATTGACATTTTATCA---------GACACGAATGCAGATGAACTTGATG 319
BSNT_02659___ 314 GAGACAAGGGAAAAGAAACCTTTAAGAAGGAAC-----TGAAAGATAAAA 358
|..|.||.||.|.||||...||||| ||| |.|||.|.|||.
BPUM_1529___f 320 GCAAAAAAGGCAGAGAACATTTTAA-----AACACTAGTCAAAAACAAAG 364
BSNT_02659___ 359 TAAATAGCTACCTCCAAGAAGGAAAAGTAGAAA-AAGTGTATATTACCTC 407
|.||||.|||..|.|||||.||.||.|| |||| ||||.|||||.|||||
BPUM_1529___f 365 TGAATAACTATTTGCAAGATGGCAAGGT-GAAAGAAGTATATATAACCTC 413
BSNT_02659___ 408 CTTTAATCTGCAATAA 423
|||||||||||||||.
BPUM_1529___f 414 CTTTAATCTGCAATAG 429
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